Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03872 ATGGACGAGGTCGGAGCATCAATTAGAGCCGCCATATCGCGGTGGGAGCTGGCGGTTTGGCGGCAGTACCAGCACGTGCTAGACAAGTGGACGCCACACGTGGGGCGACGGTGGGTTGGGTTGGTGGTGGTGGCGCTGATATACGCGCTGCGCGTTTACTTTGTGGAAGGGTTCTACTTAGTGTCGTACGGTTTGGGAATATACATCCTCAACCTTCTGATCGGGTTCCTCTCCCCTCAGGTGGACCCCGAGATTCTTGATGCCGAGGGCCCCACCCTCCCCTCCTCCGCTAACGACGAGTTTCGTCCCTTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCAATCACAAAGGCGTTTTGTGTTGCGTTTGTGATGACTTTCTTTAGTGCGTTTGATGTTCCTGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACGCTTACAATGAGGAGACAGATATCTCACATGATTAAGTACAAATATCTACCCTTCTCATCTGGAAAACAGCGTTATGATGGAAAGAGAGCATCACCTGAAAGCCCAAGCGTTTCAGAGGGCTGA 576 0.5278 MDEVGASIRAAISRWELAVWRQYQHVLDKWTPHVGRRWVGLVVVALIYALRVYFVEGFYLVSYGLGIYILNLLIGFLSPQVDPEILDAEGPTLPSSANDEFRPFVRRLPEFKFWYSITKAFCVAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYLPFSSGKQRYDGKRASPESPSVSEG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03872 191 Pfam Rer1 family 18 176 IPR004932 GO:0016020
Viun3g03872 191 PIRSF AtER_Rer1p 1 187 IPR004932 GO:0016020
Viun3g03872 191 PANTHER PROTEIN RER1 9 181 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03872 Viun-Chr3 46074855 46077244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03872 1 182 Miscellaneous Gene Families AT4G39220 66.129 1.54e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03872 - - gmx:100787683 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03872 3 46074855 46077244 Viun3g03872 3 46074855 46077244 ECH
Viun9g03850 9 42986770 42989160 Viun3g03872 3 46074855 46077244 ECH
Viun2g02143 2 29468106 29470236 Viun3g03872 3 46074855 46077244 PCT