Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02143 ATGGACGTAGGAGTCGCCGACGATCATTCCCCGGAAGCCACAATATCGCGGTGGAAATTTGCGATGTCGCGGCAGTACCAGCACATGCTCGACAAAACGACGCCGCACGTCCTCCGCCGCTGGATCGGGTGTCTGGTGGTGGCTGCCGTCTACGTCCTCCGCGTGTACTTGGTCCAAGGCTTTTACATCGTCTCCTACGCCCTTGGCATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTCACGACGGCCCCACCCTCCCCACCCGAGGATCCGATGAGTTCCGCCCCTTCGTTCGCCGCCTCCCAGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTATTCTGGCCGATACTCCTTTTCTACTGGGTGGTCCTATTCACACTTACAATGAGGAGACAGATATCACACATGATCAAATATAAATATGTTCCATTCTCATTTGGGAAACAGCGCTATGATGGAAAGAGAACACCAACAGATAGCACAAGCCCAACAACCGCGGACTGA 582 0.5275 MDVGVADDHSPEATISRWKFAMSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKRTPTDSTSPTTAD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02143 193 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
Viun2g02143 193 PANTHER PROTEIN RER1 6 181 IPR004932 GO:0016020
Viun2g02143 193 Pfam Rer1 family 20 177 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02143 Viun-Chr2 29468106 29470236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02143 1 193 Miscellaneous Gene Families AT4G39220 67.857 1.01e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02143 - - gmx:100805147 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02143 2 29468106 29470236 Viun2g02143 2 29468106 29470236 ECH
Viun2g02143 2 29468106 29470236 Viun3g03872 3 46074855 46077244 PCT