Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03861 ATGAAGAACACAAACACCAACACCAAATTCATCCTTCTCCACCCTTATATCCAAAAACAAGGAAGCTCTAACCGCTTATGGCTCCTAGCCTTTATATCAATCCTCACCCTCGCTTTCCTCGTCACCCTCATTTACACCAGAGAATCCACCTTCATCACCACCGCAACTTCTTCCGTGATTGCTTCTTCCAATGCCCCGGTTTCTGCTCTCGGAACCGCTCCTTTGCCGGCCACCGTGATCAACACTCTCCTCCACTACGCCTCAAAATCCAACGACACCAACCGCATGCCACACTCAGACCTCAAACCCATCTCCGACGTGCTCCGGAAGTGCTCGTCCCCGTGCAACTTACTCATCTTCGGTCTCACGTCCGAAACCCTTCTCTGGAAAGCCCTCAACCACTACGGCAGAACCGTGTTCATCGACGAAAACCGTTATTACGCTGCATATTACGAAGAACTGCACCCAGAAATCGACGCCTACGACGTGCAATACACCACCAAGAGAAGCGAGATGAAGGAGCTCATAGCCTCTGCTAAAGAACGGGTAGCCAACGAGTGCAAGCCGGTGCAGAATCTTCTGTTTTCAGACTGCAAACTGGGACTCAACGACCTTCCCAACCACGTGTACGAGGTTGACTGGGATATCATACTGGTGGACGGGCCACGTGGCGACTGGCCCGACGCCCCTGGAAGGATGTCGGCGATCTTCACCGCCGGTGTTCTGGCGAGGAGCAAAAAGGGTGGGAACCCTAAGACTCATGTGTTTGTGCATGACTTCTCTGGCGAGGTGGAAAAGGTTTGTGGGAGTGAGTTTCTTTGCAGTGAGAATTTGTTGGAGGCAAGTGAGAATTTAGGGCATTATGTGGTGGAAAGAATGGATGAGAGCAGTGTTCAGTATTGTAAGAGTCACTCTTCTTCTGGGTCAGGGAATGCTTCATCAACGTAA 948 0.5116 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTATSSVIASSNAPVSALGTAPLPATVINTLLHYASKSNDTNRMPHSDLKPISDVLRKCSSPCNLLIFGLTSETLLWKALNHYGRTVFIDENRYYAAYYEELHPEIDAYDVQYTTKRSEMKELIASAKERVANECKPVQNLLFSDCKLGLNDLPNHVYEVDWDIILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFSGEVEKVCGSEFLCSENLLEASENLGHYVVERMDESSVQYCKSHSSSGSGNASST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03861 315 NCBIfam TIGR01627 domain 75 301 IPR006514 GO:0045492
Viun3g03861 315 Pfam Polysaccharide biosynthesis 101 287 - -
Viun3g03861 315 PANTHER OS11G0490100 PROTEIN 12 302 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03861 Viun-Chr3 45880573 45882160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03861 - - gmx:100790865 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02138 2 29436619 29438164 Viun3g03861 3 45880573 45882160 ECH
Viun3g03861 3 45880573 45882160 Viun3g03861 3 45880573 45882160 ECH
Viun2g02138 2 29436619 29438164 Viun3g03861 3 45880573 45882160 PCT