Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02138 ATGAAGAACACTAACGGCAACACAAAATTCATTCTTCTCCACCCATATATCCAGAAACAAGGAAGCTCCAACCGTCTATGGCTTCTTGCCTTCATATCCTTCTTCACCCTCGCCTTCCTCGCCACCCTCATTTACACCAGAGACACAACCTCATCCATCACCACCACCACCACCTCTTCCACCACTTTATCTACTTTCACCACCACCCCTTTGCCTTCCTCCGTCATCAACACCCTCCTCCACTATGCCTCAAAATCCAATGACACCTACCGCATGTCCCACTCAGATCTCAAAACCATCTCCGACGTGCTTCGAAAGTGTCCGTCACCGTGCAACTTCCTCGTCTTCGGCCTCACCCCAGAGACCCTCCTCTGGAAAGCCCTCAACCACAACGGAAGAACGGTTTTCATCGATGAAAACCGGTACTACGCCGCGTATTTCGAAGAAAAGCACCCCGAAATCGATGCCTACGACGTGCAGTATACGACCAGAAGAAGCGAGATGAAGGAGCTGATTGCCTCGGCTAAAGAACAGTCGGGAAACGAGTGCAGGCCGGTGCAGAATCTTCTGTTTTCTGAGTGCAAGTTAGGACTGAACGATCTTCCGAACCACGTTTATGAAGTGGATTGGGATGTGATATTGGTGGACGGGCCGAGAGGTGACTGGCCCGACGCCCCCGGCAGAATGTCGCCGATCTTCACCGCCGGCGTGCTTGCCCGGAGCAAGAAGAGTGGGAACCCGAAGACGCATGTGTTTGTGCATGACTTCTCGGGGAAAGTGGAAAGGGTTTGCGGGAACGAGTTTCTGTGCAAGGAAAATTTGGTGGAGACAACGCACTCTTTGGGACACTATATTCTGGAAAAAATGGAGGAGAGTAGCGTGAAGTATTGTAAGAATCATAACCATTCATCAGGGTCTGCTTCTTCTTCGTCTTAG 936 0.5096 MKNTNGNTKFILLHPYIQKQGSSNRLWLLAFISFFTLAFLATLIYTRDTTSSITTTTTSSTTLSTFTTTPLPSSVINTLLHYASKSNDTYRMSHSDLKTISDVLRKCPSPCNFLVFGLTPETLLWKALNHNGRTVFIDENRYYAAYFEEKHPEIDAYDVQYTTRRSEMKELIASAKEQSGNECRPVQNLLFSECKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSPIFTAGVLARSKKSGNPKTHVFVHDFSGKVERVCGNEFLCKENLVETTHSLGHYILEKMEESSVKYCKNHNHSSGSASSSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02138 311 NCBIfam TIGR01627 domain 70 297 IPR006514 GO:0045492
Viun2g02138 311 PANTHER OS11G0490100 PROTEIN 19 298 IPR006514 GO:0045492
Viun2g02138 311 Pfam Polysaccharide biosynthesis 96 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02138 Viun-Chr2 29436619 29438164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02138 - - pvu:PHAVU_002G016200g 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02138 2 29436619 29438164 Viun3g03861 3 45880573 45882160 ECH
Viun2g02138 2 29436619 29438164 Viun2g02138 2 29436619 29438164 ECH
Viun2g02138 2 29436619 29438164 Viun3g03861 3 45880573 45882160 PCT