Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03829 ATGGTAGTTCTTTTGGCACTTTCCCTCGTTAATGGCTTCTCCTGCCTCAAGCTGGGAGAAACTTGTGGCTCTGATAAGAAATGTGACGGTGGTCTTAATTGTGGAACATGCGCTGAAAATGGGAATACCCGCTCTAGATGCGTAAGGACCCAACCTATAATCCCTACTTCCAAGGTGAAAGGTTTGGCGTTCAACAGATATTCATGGCTCACAACTCATAACTCATTTGCTCAATCTGGCGTTAAATCGGACTCAGGATCAATCATTATAACCACCACAACACAGGAAGACTCAGTTGCCCAACAACTCGCTAATGGAGTTCGTGGGCTTATGTTAGACATGTACGAATTTAACGATGACATATGGTTGTGTCACTCCTTCGGAGGCAAATGTTACGAAGCCACGTCCTTTAAACCTGCTATAAAGGTGCTTAAAGACGTTAAAGCATTTCTTGAAGCAAATCCGTCGGAAATTGTGACCATCTTCATTGAAGACTACGTGTCATCTCCCCAGGGGATTTCAAAGGTCTTTAACGATGCTGGGTTGAACAACTACTTGTTTCCACTCTCCAGAATGCCCAAAGACGGTGAAGAATGGCCAACCGTCGATGACATGGTTCAGAAGAATCAACGCTTACTTCTTTTTACCTCTAAATCATCTAAAGAATCTTCTGAAGGCATTGCTTATCAGTGGACATACGTTGTAGAAAACCAATATGGAGATGGCGGAATGGTTAATGGTTCTTGTCCACACCGTGGAGAATCTCCAGCCATGAACACCAAATCAAGGTCATTGGTTTTGATGAACTATTTTCTGAGTAATGCTAATTCATCTTCGACTTGTGCTCACAATTCGGCTCCGTTAGTTAACATGCTGAAAACTTGTCATGCTGCTGCTGATAATCGGTGGCCCAATTTCATTGCCATTGACTTTTATATGAGGAGTGATGGAGGAGGAGCCCCTGAAGCTGTTGACATAGCCAATGGCCACTTAACATGCGGATGTGACAACATTGCCTATTGCAAGGAAAATGCCGAATATGGAAAATGTGATGTGCCTGTACTTTCTCCACCGCCACCGGCGGCTGCTCCCCCAGTCGCCGTTGAAAAAAAAGCAGAGCCACCGACGGAGGAAGAACTTCATGTGGACACCCCTCTCAAGTTGCTGAAATTTTTATGGAACTGGTTGCTAAGTTTGTATAATAACAAAGATTGA 1215 0.4403 MVVLLALSLVNGFSCLKLGETCGSDKKCDGGLNCGTCAENGNTRSRCVRTQPIIPTSKVKGLAFNRYSWLTTHNSFAQSGVKSDSGSIIITTTTQEDSVAQQLANGVRGLMLDMYEFNDDIWLCHSFGGKCYEATSFKPAIKVLKDVKAFLEANPSEIVTIFIEDYVSSPQGISKVFNDAGLNNYLFPLSRMPKDGEEWPTVDDMVQKNQRLLLFTSKSSKESSEGIAYQWTYVVENQYGDGGMVNGSCPHRGESPAMNTKSRSLVLMNYFLSNANSSSTCAHNSAPLVNMLKTCHAAADNRWPNFIAIDFYMRSDGGGAPEAVDIANGHLTCGCDNIAYCKENAEYGKCDVPVLSPPPPAAAPPVAVEKKAEPPTEEELHVDTPLKLLKFLWNWLLSLYNNKD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03829 404 Gene3D Phosphatidylinositol (PI) phosphodiesterase 55 318 IPR017946 GO:0006629|GO:0008081
Viun3g03829 404 PANTHER UNCHARACTERIZED 34 342 - -
Viun3g03829 404 SUPERFAMILY PLC-like phosphodiesterases 61 329 IPR017946 GO:0006629|GO:0008081
Viun3g03829 404 CDD PI-PLCc_At5g67130_like 55 328 - -
Viun3g03829 404 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 64 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03829 Viun-Chr3 45571310 45573729 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03829 - - gmx:100809640 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02398 11 37813449 37817062 Viun3g03829 3 45571310 45573729 ECH
Viun3g03829 3 45571310 45573729 Viun3g03829 3 45571310 45573729 ECH