Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03716 ATGTTAATGAAAACCAATCCCACTTTGTTGACGCATGCCATAATGGAACGTAGCTCCACATTCTCCTTCTTCTTCCTCTTCTTCATCTTCACATTTCAATATACCACAGTAGTCTTCTCCATGACCACCACCCAACAACGTTTTAAAGAAGCTCCAAAGTTCTATAACTCCCCCACATGCCACACCCTACAGCACCACCCGAATGACACGTGCCCTGGAAACGCAGTCCACGTGGCAATGACCCTGGACGTCACATACCTCCGAGGCTCCATGGCGGCAATCCTCTCCGTGCTCCAACACAGCTCATGTCCGGAAAACGTGATTTTTCACTTCCTCTCCGCAGCCTCTCAACCTTCTTCCTTCGCTACCCTTAACCAAACACTAACCAATTCCTTTCCTTACTTGAATTTCCAAATCTACCCCTTCGACGACCACGCCGTTTCGCGGCTCATCTCCACTTCCATACGCTCCGCGCTGGACACGCCCCTCAACTACGCGCGAAGCTACCTCGCAGACCTCCTTCCTCGCTGCGTCGTCAGAGTCGTATATCTTGATTCCGACTTAATCCTTGTTGACGACATCGCCAAACTCGCCGCCACGCCGCTGGGTGACACGGAGGTCCTAGCCGCGCCGGAGTACTGCTCCGCCAACTTCTCGGCCTACTTCACACCCTCGTTCTGGGCCAACCCCTCGCTCTCACTCTCGTTCTCGAACCGGAAGCGGCCGTGCTACTTCAACACCGGCGTTATGGTGATTGACCTACATCAGTGGCGGGCGGGGGACTATACAACAGTGATCGAAGAGTGGATGGAGTTGCAGAAGAGGATGCGGATCTACGAGCTCGGGTCACTTCCACCGTTCTTGCTGGTCTTCGCCGGAAGGATTGCGGCGGTGGATCGCCGGTGGAATCAGCACGGGCTCGGCGGGGATAATTTTCGTGGGCTTTGCCGGAAACTGCATCCCGGGCCCGTGAGCCTGCTGCATTGGAGTGGGAAGGGGAAGCCTTGGGTCAGGCTCGACGCCAACATGCCTTGTCCTTTGGACACTATGTGGGCTCCCTACGATCTGCTCCAAAGTCCTTTTGCTCTTCAGGCGTAG 1098 0.551 MLMKTNPTLLTHAIMERSSTFSFFFLFFIFTFQYTTVVFSMTTTQQRFKEAPKFYNSPTCHTLQHHPNDTCPGNAVHVAMTLDVTYLRGSMAAILSVLQHSSCPENVIFHFLSAASQPSSFATLNQTLTNSFPYLNFQIYPFDDHAVSRLISTSIRSALDTPLNYARSYLADLLPRCVVRVVYLDSDLILVDDIAKLAATPLGDTEVLAAPEYCSANFSAYFTPSFWANPSLSLSFSNRKRPCYFNTGVMVIDLHQWRAGDYTTVIEEWMELQKRMRIYELGSLPPFLLVFAGRIAAVDRRWNQHGLGGDNFRGLCRKLHPGPVSLLHWSGKGKPWVRLDANMPCPLDTMWAPYDLLQSPFALQA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03716 365 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 31 358 - -
Viun3g03716 365 SUPERFAMILY Nucleotide-diphospho-sugar transferases 76 356 IPR029044 -
Viun3g03716 365 FunFam Hexosyltransferase 77 345 - -
Viun3g03716 365 Pfam Glycosyl transferase family 8 77 338 IPR002495 GO:0016757
Viun3g03716 365 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 77 344 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03716 Viun-Chr3 44139114 44140453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03716 25 363 Glycosyltransferase AT3G50760 67.155 4.18e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03716 K20893 - gmx:100805007 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03716 3 44139114 44140453 Viun3g03716 3 44139114 44140453 ECH
Viun3g03716 3 44139114 44140453 Viun2g02014 2 28571508 28573657 ECH
Viun2g02014 2 28571508 28573657 Viun3g03716 3 44139114 44140453 PCT