Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02014 ATGGCTTCTACTAATGCACTCAATTCATCTGCATTAATAGGTTTCTGCTTCATCCTTATCATTTCCACTCATGCCGCTGCCATCACCCAACATCGACAGCAACACTTCAAACAAGCACCCAAATTCTACAACTCCCCCACCTGTGCCACCGCCGAGCCGGAACACACCCACACGTGTTGGGACGCGGCAGTTCACGTGGCCATGACACTGGACATCACCTACCTCCGGGGGTCCATGGCGGCGATCCTCTCCGTCCTCCAGCACTCCTCCTGTCCAGAAAACGTCATCTTCCACTTCGTCACCGCCGCCTCCAGAGTTTCCTCCTCCGCCCTCCTCAACCGCACCCTCTCCAATTCCTTCCCATATCTCAATTTCCAAATCTACCCCTTCAACGATCGCCAAGTTGCCGGCCTCATCTCCACCTCCATCCGCTCCGCTCTCGATTGCCCCCTCAACTACGCCCGTAACTACCTCGCCAACCTCCTCCCCTCCTCCGTCCGCAAAATCGTCTACCTCGACTCCGACCTCGTCCTCGTCGACGACATCGCCAAACTCGCCGCCACCCCACTCGGAAACGACAACAGCAACAGCACCGTCCTCGCCGCGCCCGAATACTGCAAAGCCAACTTCAGCGCCTACTTCACCCCCTCCTTCTGGTCCAACCCCTCTCTCTCCCTCACCTTCGCGGGCCGAAGGCCCTGCTACTTCAACACCGGCGTCATGGTGATTGATTTGCAACGCTGGCGGGCCGGCGACTACACTAGGAAGATCGAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTGGGCTCCCTTCCGCCGTTTCTACTCGTTTTCGCGGGCAACATAGGCCCGGTGGATCACAGGTGGAACCAGCATGGGCTTGGCGGGGATAACTTCCGCGGCCTCTGCAGAGACTTGCATCCAGGCCCGGTGAGCCTCCTGCATTGGAGTGGGAAGGGAAAACCCTGGGCCCGCCTCGACGCCAACCGCCCTTGCCCCTTGGATGCCCTATGGGCTCCCTACGATCTTCTCCAAACTCCTTTCGCTCTCGAAGCCTAG 1071 0.5873 MASTNALNSSALIGFCFILIISTHAAAITQHRQQHFKQAPKFYNSPTCATAEPEHTHTCWDAAVHVAMTLDITYLRGSMAAILSVLQHSSCPENVIFHFVTAASRVSSSALLNRTLSNSFPYLNFQIYPFNDRQVAGLISTSIRSALDCPLNYARNYLANLLPSSVRKIVYLDSDLVLVDDIAKLAATPLGNDNSNSTVLAAPEYCKANFSAYFTPSFWSNPSLSLTFAGRRPCYFNTGVMVIDLQRWRAGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFALEA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02014 356 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 336 IPR029044 -
Viun2g02014 356 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 17 349 - -
Viun2g02014 356 FunFam Hexosyltransferase 65 336 - -
Viun2g02014 356 Pfam Glycosyl transferase family 8 65 329 IPR002495 GO:0016757
Viun2g02014 356 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 347 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02014 Viun-Chr2 28571508 28573657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02014 17 354 Glycosyltransferase AT3G50760 68.421 5.53e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02014 K20893 - gmx:100783054 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02014 2 28571508 28573657 Viun2g02014 2 28571508 28573657 ECH
Viun3g03716 3 44139114 44140453 Viun2g02014 2 28571508 28573657 ECH
Viun2g02014 2 28571508 28573657 Viun3g03716 3 44139114 44140453 PCT