Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03713 ATGAGTGCCGTTAATTTTAACGCATGGCTACACCCCAGCTTCACCAGATCCAGATCCCCAACTTTTCTCTTTCACGGCCTCACTAACTCCCCCATTCCCTCCCTCATCGTTACCAAACGCCCAAGAGATAAGCTTTATTCGTCCCCGTCTTTCACAGTCTCCGCAGTGCTCACCAAAGAGGAGACGGTCGAGACGGAAGAGAAGCCGGCGTTTAACTTCAAGTCCTACATGCTCCAGAAAGCCGACGCCGTCAACCAGGCGCTTGACGACGCCGTTCCGCTCCGCGAGCCGCTGCGGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGCGGCAAGCGCGTGCGCCCCGTCCTCTGCGTCGCCGCCTGCGAGCTTGTTGGAGGCGCCGCCGCCACCGCGATGCCCGCTGCCTGCGCCGTTGAGATGATCCACACCATGTCCCTTATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAGCCTACCAACCACAAGGTCTTCGGGGAGGACGTCGCTGTCCTCGCCGGCGACGCGCTCCTCGCATTCGCCTTCGAGCACATCGCCGGCGCCACCGTCGGTGCCTCCCCGCCGCGCATCGTCCGCGCCCTCGGCGAACTCGCGCGAGCCATCGGCGCCGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAGTCCGAGGGGCTTGACGATGTCGGCCTCGAACGGTTGGAGTTTATCCATCTCCACAAGACGGCGGCCCTGCTGGAAGGCGCGGTGGTCCTTGGCGCCATCCTGGGCGGTGGAAGCGACGAGGAGATTGAGAGATTGAGGAAGTTCGCGCGGTATATAGGATTGTTGTTTCAGGTGGTTGATGACATTCTGGATGTTACGAAATCTTCCCAGGAATTGGGGAAAACTGCGGGGAAGGATCTCGCGGCTGATAAGGTTACTTATCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCCAAATTGAACAAAGATGCTCAGGATCAGCTCTCTGGCTTTGACCCTGTCAAGGCTGCTCCTTTAGTTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG 1095 0.5927 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSLIVTKRPRDKLYSSPSFTVSAVLTKEETVETEEKPAFNFKSYMLQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEEIERLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03713 364 SFLD Isoprenoid Synthase Type I 75 362 - -
Viun3g03713 364 ProSitePatterns Polyprenyl synthases signature 1. 149 165 IPR033749 -
Viun3g03713 364 SFLD Polyprenyl Transferase Like 75 362 - -
Viun3g03713 364 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 47 364 - -
Viun3g03713 364 SUPERFAMILY Terpenoid synthases 73 344 IPR008949 -
Viun3g03713 364 Pfam Polyprenyl synthetase 100 334 IPR000092 GO:0008299
Viun3g03713 364 FunFam Geranylgeranyl diphosphate synthase 70 364 - -
Viun3g03713 364 Gene3D Farnesyl Diphosphate Synthase 65 364 IPR008949 -
Viun3g03713 364 CDD Trans_IPPS_HT 96 362 IPR000092 GO:0008299
Viun3g03713 364 ProSitePatterns Polyprenyl synthases signature 2. 282 294 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03713 Viun-Chr3 44071517 44073080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03713 K13789 - gmx:100785539 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03713 3 44071517 44073080 Viun3g03713 3 44071517 44073080 ECH
Viun3g03713 3 44071517 44073080 Viun2g02009 2 28546153 28547418 ECH
Viun2g02009 2 28546153 28547418 Viun3g03713 3 44071517 44073080 PCT