Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03700 ATGGCAGCTTCCACTTCCAATGCCGTTCTTCTCGGAGATGTCTACTTCGACGAAGTCTCCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGGACGCGCCGCGCCGCTTTGCGAGCTACCGTCAATCTCACAAGATTGCAACCCTTGAACAGTCTCTTGAACTTCGGCTGCTCCACCTCCGATGCAACTTGGAGGAGTTGGAATCCGAGCTCGCTCCTTGTTGGAACCAAGCGCTCCTCCTCTCCTTGCTGCTCCGCCGATACAACGCCTCATGTTCAACACCTTTCGTCCTCCACATTTTCACTCGACCAAACAAATTTTGGTCCTGAGAAGTTGAAGTTGTTTTCCGGGTCATGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTTATTTGCGTAGATGAACAAGCGATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGACGTTGGTGTTAATGCTGGACTTTTTGCTCAAGAACTGATGTCCCATTCTGTTAGAGCAGTTGAAGAGGAACCAAAAGGTTCTGTTGATCCCGCAAGTGTTTTAGAGAAGGCTCACTCATTTACGAAGGCCAAGGGTTCATCAACGGCTTGTATCATTGCCCTTACTGATACGGGACTGCATGCCATTAATTTAGGTGACAGTGGGTTCATTGTGATTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTTACGTACCAACTGGAGAGTGGCAATGGATGTGATCTACCCAGCTCTGGTGAGGTATTCAAAATATCTGTTGCACCAGGAGATGTTGTCGTTGCTGGAACCGATGGATTGTTTGACAATCTGTACAATGATGAGGTTGCTGAAGTTGTTTTGAATGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACAGGAATAGACAGACACCATTTGCTACTGCAGCCCAGGAGGCTGGGTTCCATTATTATGGTGGGAAGCTTGATGACATAACAGTTATTGTGTCATACATAACCGGCTCAACATATATTTGCAGAGGAAGCAGCTAA 1098 0.4845 MAASTSNAVLLGDVYFDEVSAKPSGVRFRDRTRRAALRATVNLTRLQPLNSLLNFGCSTSDATWRSWNPSSLLVGTKRSSSPCCSADTTPHVQHLSSSTFSLDQTNFGPEKLKLFSGSCYLPHPDKEDYGGEDAHFICVDEQAIGVADGVGGWADVGVNAGLFAQELMSHSVRAVEEEPKGSVDPASVLEKAHSFTKAKGSSTACIIALTDTGLHAINLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGCDLPSSGEVFKISVAPGDVVVAGTDGLFDNLYNDEVAEVVLNAVRAGLEPQVTAQKIAALARQRALDRNRQTPFATAAQEAGFHYYGGKLDDITVIVSYITGSTYICRGSS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03700 365 Pfam Stage II sporulation protein E (SpoIIE) 142 352 IPR001932 -
Viun3g03700 365 PANTHER PROTEIN PHOSPHATASE 2C 86 355 IPR039123 -
Viun3g03700 365 SUPERFAMILY PP2C-like 119 352 IPR036457 -
Viun3g03700 365 SMART PP2C_4 105 352 IPR001932 -
Viun3g03700 365 FunFam 5-azacytidine resistance protein azr1 123 248 - -
Viun3g03700 365 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Viun3g03700 365 Gene3D - 126 251 IPR036457 -
Viun3g03700 365 SMART PP2C_SIG_2 128 354 IPR001932 -
Viun3g03700 365 Gene3D - 257 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03700 Viun-Chr3 43939236 43950205 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03700 K17508 - gmx:100784475 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03700 3 43939236 43950205 Viun3g03700 3 43939236 43950205 ECH
Viun3g03700 3 43939236 43950205 Viun2g01990 2 28426554 28430056 ECH
Viun2g01990 2 28426554 28430056 Viun3g03700 3 43939236 43950205 PCT