Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01990 ATGATGCCTGGCATTTTCTCAAGGCCGAATGCTACCATTTACTGTCGCATTCGGGAAGCATTGACTCGGCAACAAGGGGTACCGGCATTCTTGTATAGAAGTTCAGGGTTGTCTCTTTGTTCACTGTATTCAACTTTCTTTTTGCCCGGTTCAATTCATTGCTCTTCAAGCCACACGCTTATCCCAAAATCAATGGCTACTGCTTCCCATTGCAATGCTGTGCTGGGAGATGTTTATGTTAATGGTTTAATCTCAGGTTGTGCTAGTGTGCAAGACTTCACAAAGCCTGCTGTTGTGTCCTTCAAAGACAAAAATCTTAAAGGCTGCCTAAGGGGTAGCGGGAATCTAAGGAGACCACAACCTTCGTTTGGTTCTTTGAGTTTTGGTAGTTCTACTTTTGATGGTAATTGGAGGATCCGGGATTTCAGTTTGCTTCATGGATCATGGCTCAAGAATTTCTCTACCTCTTCTTCTGCCTGCCCCTCAGCTGGGGCTGCTCGTGCTGTCTCTTTTGATGGCAGCCCTCCCGATGAACAGCTTGCAAATTCCTCTTTTTCACCTGACGAAACTACTGTTGGTGGCAAGACCTTGAAGATGTTGTCAGGATCATGTTATCTACCGCATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCGCAGATGAACATGCAATTGGTGTTGCTGATGGTGTGGGTGGCTGGGCTGACGTTGGTGTTAATTCAGGACTGTTTTCCCGGGAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCCCAAGGTTCTTTTAATCCAACAAGGGTGTTAGAGAAGGCTCATTCAAATACAAAGGCTAAGGGTTCATCAACAGCTTGTATTGTTGCCCTTACTGATAAGGGACTACATGCTATTAATTTGGGCGACAGTGGATTTATTGTGGTTAGAGATGGATGCACCATTTTCCAGTCCCCTGTCCAACAACATGACTTCAATTTCACATATCAGTTGGAGAGTGGCTATGGAGGTGATCTACCCAGCTCTGCGGAGGTTTTTACCATACCCGTTGCTTCAGGAGATGTAGTCATTGCTGGAACAGATGGCTTATTTGACAATCTGTACAATAGTGAGATCACTGCAGTTGTTGTACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGAGAGCGCTGGACCCGAGCAGGCCGACACCATTTTCTACTGCTGCTCAGGAGGCTGGCTTCCGTTATTATGGTGGCAAACTTGATGACATTACTGTTGTTGTCTCATACATATCTGGCTCACTTAGCGAGTGA 1338 0.4589 MMPGIFSRPNATIYCRIREALTRQQGVPAFLYRSSGLSLCSLYSTFFLPGSIHCSSSHTLIPKSMATASHCNAVLGDVYVNGLISGCASVQDFTKPAVVSFKDKNLKGCLRGSGNLRRPQPSFGSLSFGSSTFDGNWRIRDFSLLHGSWLKNFSTSSSACPSAGAARAVSFDGSPPDEQLANSSFSPDETTVGGKTLKMLSGSCYLPHPDKEETGGEDAHFICADEHAIGVADGVGGWADVGVNSGLFSRELISNSVRAIQEEPQGSFNPTRVLEKAHSNTKAKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFQSPVQQHDFNFTYQLESGYGGDLPSSAEVFTIPVASGDVVIAGTDGLFDNLYNSEITAVVVHAIRAGLEPQVTAQKIAALARQRALDPSRPTPFSTAAQEAGFRYYGGKLDDITVVVSYISGSLSE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01990 445 Gene3D - 207 334 IPR036457 -
Viun2g01990 445 MobiDBLite consensus disorder prediction 168 189 - -
Viun2g01990 445 SMART PP2C_SIG_2 212 439 IPR001932 -
Viun2g01990 445 SMART PP2C_4 190 437 IPR001932 -
Viun2g01990 445 ProSiteProfiles PPM-type phosphatase domain profile. 200 439 IPR001932 -
Viun2g01990 445 Pfam Stage II sporulation protein E (SpoIIE) 227 437 IPR001932 -
Viun2g01990 445 Gene3D - 335 444 IPR036457 -
Viun2g01990 445 PANTHER PROTEIN PHOSPHATASE 2C 180 439 IPR039123 -
Viun2g01990 445 SUPERFAMILY PP2C-like 203 437 IPR036457 -
Viun2g01990 445 FunFam 5-azacytidine resistance protein azr1 208 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01990 Viun-Chr2 28426554 28430056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01990 K17508 - gmx:100785804 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01990 2 28426554 28430056 Viun2g01990 2 28426554 28430056 ECH
Viun3g03700 3 43939236 43950205 Viun2g01990 2 28426554 28430056 ECH
Viun2g01990 2 28426554 28430056 Viun3g03700 3 43939236 43950205 PCT