Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03676 ATGGTGAACCTGGTTGCAGCGCAGAGGCCATTGCTGCATGGGTTAATGAAGATGGCGGGGATCAGGCCGTACACGGTGGAGATTGAGCCGGGGACCGTGATGAGTTTCTGGGTCCCTTCAGAGACCATAACGAAGCCCAAGAAAAAGGAGGAAAAGCCCACAATCGCAGCGAAGCCCAGCAAGCCCATTGTGGTTCTGGTGCACGGTTTCGCCGCGGAAGGAATCGTGACGTGGCAGTTCCAAGTGGGGGCGTTGACGAAGAAGTACGCTGTTTATGTTCCGGATCTTCTGTTCTTCGGAGGGTCCGTGACCGATAAAGCCGACAGGACGCCAAGGTTTCAAGCGGAGTGTCTGGCGAGGGCGTTAAGGAAACTTGGGGTGGAGAAATGCATAGTGGTTGGGTTCAGTTATGGGGGAATGGTGGCGTTTGAGATGGCTGAGATGTACCCTGAAATGGTTGAAGGAATGGTTATTTCTGGGTCCGTTTTGGCCATGTCGGACTCGCTCAGCGCCGCCTCACTTGAACATCTTGGGTTCTCTTCTTCTTCGGATCTCTTGCTGCCTACCTCTGTTAAGGGTCTTAAGGCCCTCTTGTCCGTCGCTGCTCACAAAAAACTCTGGTTTCCCCATCGTTTGCACAAAGATTTTCTTGAGGTGATGTTCTCGAATAGAAAGGAACGGGGTGAACTATTGGAGGGATTAATAATTAGCAATACGACCACCCCCAATTTTCCACAGAGAATACATCTTTTATGGGGCCAGAATGATCAAATTTTCAAACTGGAGCTTGCACAAAATATGAAAGAAGAACTAGGGGATGGCACAACGCTTGAAAGCATAGAGAAAGCTGGTCACCTTGTTCAGCTGGAGCGACCCTGTGTCTACAATAGATGCCTCAAGAACTTTCTTGCTTCCTTCTTGGCCAAAAATCATTGA 936 0.4989 MVNLVAAQRPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPKKKEEKPTIAAKPSKPIVVLVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSVTDKADRTPRFQAECLARALRKLGVEKCIVVGFSYGGMVAFEMAEMYPEMVEGMVISGSVLAMSDSLSAASLEHLGFSSSSDLLLPTSVKGLKALLSVAAHKKLWFPHRLHKDFLEVMFSNRKERGELLEGLIISNTTTPNFPQRIHLLWGQNDQIFKLELAQNMKEELGDGTTLESIEKAGHLVQLERPCVYNRCLKNFLASFLAKNH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03676 311 PRINTS Epoxide hydrolase signature 280 302 IPR000639 GO:0003824
Viun3g03676 311 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Viun3g03676 311 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Viun3g03676 311 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Viun3g03676 311 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Viun3g03676 311 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Viun3g03676 311 PRINTS Alpha/beta hydrolase fold signature 248 262 IPR000073 -
Viun3g03676 311 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Viun3g03676 311 Gene3D alpha/beta hydrolase 16 306 IPR029058 -
Viun3g03676 311 PANTHER SI:DKEY-122A22.2 1 304 - -
Viun3g03676 311 SUPERFAMILY alpha/beta-Hydrolases 58 304 IPR029058 -
Viun3g03676 311 Pfam alpha/beta hydrolase fold 62 169 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03676 Viun-Chr3 43688360 43691688 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03676 - - gmx:100816070 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03676 3 43688360 43691688 Viun2g01964 2 28196652 28200494 ECH
Viun3g03676 3 43688360 43691688 Viun3g03676 3 43688360 43691688 ECH
Viun2g01964 2 28196652 28200494 Viun3g03676 3 43688360 43691688 PCT