Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01964 ATGATTAACTTTGTGACAGCATACGAGTGGTTGTTGCATTGGCTGGTGAGGGCGGTGGGGTTGAGACCTTATATGGTGGAGACAGAGCCGGGGACGGTTATAAAATTCTGGGGGCCATGCGACGCCGTTTCGAACGGCAAACGCCTTTGTTCCAAACCAGTGGTGGTTCTCCTGCACGGCTTCTGCGGCGACGGAATCATCAACTGGCAGTGTCAGGTAGCAGCTTTGACGAGAGACTACGCGGTCTACGTGCCGGACCTTCTCTTCTTCGGTGGATCCATCACCGATAAGGAGGAACGGTCGCCGGAGTTTCAAGCGGAGTGTTTGGCGGCGGGGTTGGGGAAGCTCGGGGTGGAGAAGTGCGTTGTGGTTGGGTTCAGTTATGGAGGGTTTGTGGCGTTGAAAATGGCTGAGATGTACGTTGAGATGGTGGAGGGAGTGGTGTTGTCTGGAGCCGTTGTGGCTGTTACGGAGTCCGTAGTTTTGAGAGCAGTGGAAGGGATAGGGTATTCGTCGATTTCCGAGATGTTGTTGCCGGTGTCCGTTGGGGAACTGAAGATCCTTCTTTCCGTTGCTTGTTACAGAAACCTCTCCTTACCCAACCGTTTCTACGCAGACTTCTTACAGGCGATGTACTCAAATAGGAAGGAGCGAGCTGAGCTGTTGGAGGCCTTAGACATTAGCTACAAACAGATCAATATCCCAAAACTTCACCAGCGAATACACCTTCTATGGGGTGAGGATGACAAAATTTTTAAACTAGAGTTTGCGCAGAAAATGAAAGAGAAGGTGGGAAATAATGCAACATATGAAGGCATAAAGAGTGCGGGTCACCTGGTTCACCTGGAGCGACCCTGGCTCTATAATAAGAGCCTCAAGCAATTTCTTTCTTCTGTTTTTCCATTGCCAGCTGCCAAAAACTGA 924 0.5043 MINFVTAYEWLLHWLVRAVGLRPYMVETEPGTVIKFWGPCDAVSNGKRLCSKPVVVLLHGFCGDGIINWQCQVAALTRDYAVYVPDLLFFGGSITDKEERSPEFQAECLAAGLGKLGVEKCVVVGFSYGGFVALKMAEMYVEMVEGVVLSGAVVAVTESVVLRAVEGIGYSSISEMLLPVSVGELKILLSVACYRNLSLPNRFYADFLQAMYSNRKERAELLEALDISYKQINIPKLHQRIHLLWGEDDKIFKLEFAQKMKEKVGNNATYEGIKSAGHLVHLERPWLYNKSLKQFLSSVFPLPAAKN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01964 307 SUPERFAMILY alpha/beta-Hydrolases 46 296 IPR029058 -
Viun2g01964 307 PANTHER SI:DKEY-122A22.2 1 297 - -
Viun2g01964 307 Pfam alpha/beta hydrolase fold 53 156 IPR000073 -
Viun2g01964 307 Gene3D alpha/beta hydrolase 43 299 IPR029058 -
Viun2g01964 307 PRINTS Alpha/beta hydrolase fold signature 123 136 IPR000073 -
Viun2g01964 307 PRINTS Alpha/beta hydrolase fold signature 241 255 IPR000073 -
Viun2g01964 307 PRINTS Alpha/beta hydrolase fold signature 137 150 IPR000073 -
Viun2g01964 307 PRINTS Alpha/beta hydrolase fold signature 79 94 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01964 Viun-Chr2 28196652 28200494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01964 55 297 Miscellaneous Gene Families AT1G80280 23.827 2.30e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01964 - - pvu:PHAVU_002G030900g 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03676 3 43688360 43691688 Viun2g01964 2 28196652 28200494 ECH
Viun2g01964 2 28196652 28200494 Viun2g01964 2 28196652 28200494 ECH
Viun2g01964 2 28196652 28200494 Viun3g03676 3 43688360 43691688 PCT