Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03215 ATGGCAGTAAATGTGTTTTCATGGACAAAATCAAAACCCAGAAAAACACAACCTCGTTCCGTTGTTGGAACCAGAAAACACAAATGTGGACAAGCACACGCAAATTTGTCAACACATACGAGTGAAGGAAGTTTCCTAAACATGGCTTTTAGCCTATGTTTACGCTCCCCAATCATTTCTCTCCTTCTACATTTCCTCCTTGTTGTATCTACCCTTTGTCTTGTTCGTTCATCGCAATTTGGTAACCACCTAGTTGCCAATCAAACTTTTCAGCCAAAGGAAGAGTTGCGCAAGTTGAACGTCATAAGAGCTCGCCTTCAGCAAATCAACAAACCTCCTGTTAAGACAATCCAGAGTCCTGATGGAGATATAATTGACTGTGTTATGTCTCATCAACAACCAGCCTTTGATCATCCTTTATTGAAAGGACATAAACCATTGGATCCCCCAGAAAGACCGAGAGGGCATAACGAAATGGATGATTTGAGTGAGAACTTTCAGTTGTGGAGCTTGTCTGGTGAGTCGTGTCCAGAAGGGACAATTCCAATAAGAAGAACAAGGGAAGAGGATATTTTAAGAGCTAGCACTATTCGCAGATTTGGAATGAAAAACACACTAAACCGTGTCAAAATGGACACCAAAAATGATGGACATGAGCATGCAATTGGGTATGTAACTGGGGATAAGTACTATGGAGCAAAGGCTATCATAAATGTGTGGTCACCCAATGTGAAAAACCCATTTGAATTTAGCCTGTCTCAAATGTGGGTTATTTCTGGTTCATTTGGGGATAATCTCAACACCATTGAAGCTGGTTGGCAGGTCTACCCGAGGCTATTTGGGGATTGGAAACCTAGATTCTTTATTTATTGGACGAATGATTCATACCACAGAACTGGGTGTTACAATTTACTTTGTCCAGGCTTTGTTCAAACCAACAAAAACATTGCACTTGGAGCAGCAATCTCTCCAATTTCTTCATATAATGGTGACCAATTTGATATTACCTTACTCATTTGGAAGGATCCAAAGACTGGGAACTGGTGGCTTCAATATGGAGCCGGGACCCTAATTGGGTACTGGCCATCGTTGTTGTTCGGCAACTTAAGAGATCATGCAAGCATGATTCACTTTGGTGGAGAAATAGTGAATTTAGGGTTATTCGGGTCTCACACTTCCACTCAAATGGGTAGTGGACATTTTGCAGAAGAGGCTTATGGAAAAGCTTCATACTTCAGGAATATGCAAGTTGTGGATTGGCGCAACAACTTGATTCCCTTGTCAAATCCAAAGGTTCTAGTAGATCACCCCAATTGCTACAACCTACAACAAGGGTTTAATAAGGCATGGGGGAATTATTTATACTATGGTGGACCTGGAAGAAATGTAAGGTGTCCATAA 1401 0.4126 MAVNVFSWTKSKPRKTQPRSVVGTRKHKCGQAHANLSTHTSEGSFLNMAFSLCLRSPIISLLLHFLLVVSTLCLVRSSQFGNHLVANQTFQPKEELRKLNVIRARLQQINKPPVKTIQSPDGDIIDCVMSHQQPAFDHPLLKGHKPLDPPERPRGHNEMDDLSENFQLWSLSGESCPEGTIPIRRTREEDILRASTIRRFGMKNTLNRVKMDTKNDGHEHAIGYVTGDKYYGAKAIINVWSPNVKNPFEFSLSQMWVISGSFGDNLNTIEAGWQVYPRLFGDWKPRFFIYWTNDSYHRTGCYNLLCPGFVQTNKNIALGAAISPISSYNGDQFDITLLIWKDPKTGNWWLQYGAGTLIGYWPSLLFGNLRDHASMIHFGGEIVNLGLFGSHTSTQMGSGHFAEEAYGKASYFRNMQVVDWRNNLIPLSNPKVLVDHPNCYNLQQGFNKAWGNYLYYGGPGRNVRCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03215 466 Pfam Neprosin 249 459 IPR004314 -
Viun3g03215 466 Gene3D - 235 354 - -
Viun3g03215 466 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 102 462 - -
Viun3g03215 466 Pfam Neprosin activation peptide 116 224 IPR025521 -
Viun3g03215 466 FunFam Putative carboxyl-terminal proteinase 239 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03215 Viun-Chr3 38839697 38843499 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03215 - - gmx:100792240 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01272 2 23259240 23263234 Viun3g03215 3 38839697 38843499 PCT