Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01272 ATGTGTTTGATAGATTTGGTGGGAGACGTGTTTCCCCTGGAAGAATCAAAGCCTGGGAACACTCACTTTTGTTTTGTTCCTGCAAGAACAAGAAGACAAGGCCAATGCGAACAAACTCACTCGGATTTGTCAATAGAAACAAGGAAACCAGATCTCTCAAGCATGAATTTTAGCTTGTGTTTGAGCTCCCCAATCATTTCCACACTTGTACATTTCCTTCTTCTTGTTTCTTTGCTTTGCCCTGTTTGTTCCTCAGAAATGGGCAACACCCCGGTTGCCAATCACACTTTTAAGCCGCAAGAACAGATTCACAAGATGAACATCATAAGAACTCGTCTTCAACAAATCAACAAGCCCGGTGTTAAGACAATTCAGAGTCCTGACGGTGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCTTTTGATCATCCTATGTTGAAGGGACACAAACCACTGGATCCTCCAGAAAGGCCTAAAGGTCATAACCGAAGAGACATATTGAGTGAGAATTTTCAGCTATGGACCATGTCAGGGGAATCATGTCCAGAAGGTACAATTCCAATCAGAAGAACAAAAGAACAAGACATGTTAAGAGCTAGTTCTGTAAGCAGATTTGGAAGGAAAATAAGAAGGCGTGTTAGAAGGGACACCAGCAGCAATGGCCATGAGCATGCAGTTGGGTATGTGAGTGGAGAACAGTACTATGGAGCAAAGGCTAGCATTAACGTGTGGGCACCTCGTGTGACAAATCAAGATGAATTCAGCCTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGATACCCCAGATTCTTTACTTATTGGACGAGCGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGCTCGGGTTTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCCTATGCTGGTGGGCAATTTGATATTAGTTTGCTGATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTCGGATCCGGAATCCTAGTCGGGTATTGGCCTTCGTTCTTGTTCACACACCTTAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAGTGGTGAATTCAAGGCAATCCGGGTCTCACACTTCGACCCAAATGGGTAGTGGGCATTTTGCAAGTGAAGGGTTTGGGAAAGCTTCATACTTTAGGAACATGCAAGTTGTGGATTGGGACAACAACCTGGTACCCTTGTCGAATCTTAGGGTTCTAGCAGATCACCCCAATTGCTATGACATTCAAGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGAAATGTGAGATGTCCCTAA 1419 0.4412 MCLIDLVGDVFPLEESKPGNTHFCFVPARTRRQGQCEQTHSDLSIETRKPDLSSMNFSLCLSSPIISTLVHFLLLVSLLCPVCSSEMGNTPVANHTFKPQEQIHKMNIIRTRLQQINKPGVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNRRDILSENFQLWTMSGESCPEGTIPIRRTKEQDMLRASSVSRFGRKIRRRVRRDTSSNGHEHAVGYVSGEQYYGAKASINVWAPRVTNQDEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEVVNSRQSGSHTSTQMGSGHFASEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01272 472 Pfam Neprosin activation peptide 123 230 IPR025521 -
Viun2g01272 472 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 109 468 - -
Viun2g01272 472 MobiDBLite consensus disorder prediction 148 164 - -
Viun2g01272 472 Gene3D - 245 361 - -
Viun2g01272 472 MobiDBLite consensus disorder prediction 145 164 - -
Viun2g01272 472 Pfam Neprosin 253 465 IPR004314 -
Viun2g01272 472 FunFam Putative carboxyl-terminal proteinase 245 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01272 Viun-Chr2 23259240 23263234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01272 - - gmx:100776639 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01272 2 23259240 23263234 Viun2g01272 2 23259240 23263234 ECH
Viun2g01272 2 23259240 23263234 Viun3g03215 3 38839697 38843499 PCT