Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03103 ATGGCACTCAGCAACAACGTGATAGGGGCCATCAACTTCGTCGCGGTGCTTCTCTCAATTCCGATCATTGCTGCAGGGATCTGGCTAACAACAGAGCCAGCAGATTCCTGCGTCAAAATCCTTCAATGGCCTGTCATAATCTTGGGGGTTCTCATACTTCTGGTGGCTCTGGCAGGGTTTGTAGGAGCCTTCTGGAGAATCCCTTCGCTTCTCGTCTTCTACCTCGTTGCCATGTTCCTCCTTATTGTCTTGCTTCTTAGCTTGGTCGTTTTCACCTATGCTGTCACCCTTAGAGGCCATGGCAACATTGAACCCAATCGTTCTTACTTGGAATATCGTATCGATGATTTCTCACTTTGGCTTCGCCGAAGAGTACGAAGCTCCAACAGATGGGACAACGTTAGAAGCTGTCTTATGTCGTCAAAGATATGTGCTGAGTTGGATCAACGCTACCGAACGGCGCAGGACTTCTTCAACGCACACCTAAACCCCATTCAGTCAGGGTGCTGCAAGCCCCCAACAAAATGTGGTTACACGTTTGTGAACCCAACGTATTGGATTAGCCCCATCAACATGGCAGAAGACATGGATTGCACGAAATGGAGCAACGACCAAGCACAACTTTGCTACAACTGTGACTCCTGCAAAGCTGGTTTGTTGGCAACCCTAAGGGTGGAGTGGAGAAGGGCCAATGTGATATTGATCGTTACTCTTGTTGCTTTAATTGCACTGTATTTGGTTGGCTGCTTTGCTTTTAGGAATACCAAAACGGATGACCTCTTTCGCAAATACAAGCAAGGTTACTCTTGA 810 0.4765 MALSNNVIGAINFVAVLLSIPIIAAGIWLTTEPADSCVKILQWPVIILGVLILLVALAGFVGAFWRIPSLLVFYLVAMFLLIVLLLSLVVFTYAVTLRGHGNIEPNRSYLEYRIDDFSLWLRRRVRSSNRWDNVRSCLMSSKICAELDQRYRTAQDFFNAHLNPIQSGCCKPPTKCGYTFVNPTYWISPINMAEDMDCTKWSNDQAQLCYNCDSCKAGLLATLRVEWRRANVILIVTLVALIALYLVGCFAFRNTKTDDLFRKYKQGYS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03103 269 PANTHER TETRASPANIN-8-RELATED 1 257 IPR044991 GO:0009734|GO:0016020
Viun3g03103 269 Pfam Tetraspanin family 6 249 IPR018499 GO:0016020
Viun3g03103 269 PRINTS Transmembrane four family signature 6 29 - -
Viun3g03103 269 PRINTS Transmembrane four family signature 38 64 - -
Viun3g03103 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03103 Viun-Chr3 37321815 37323848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03103 1 269 Miscellaneous Gene Families AT5G46700 67.658 8.67e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03103 - - gmx:100789266 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03103 3 37321815 37323848 Viun3g03103 3 37321815 37323848 ECH
Viun2g01420 2 24697719 24699040 Viun3g03103 3 37321815 37323848 PCT