Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02259 ATGGCAACCACCACAGAGAGGGATGTGGAGAACAAGAGTCACGAAGGACTCAAACATCTTGGGTTTGTTAAGATTGCGGCCATTAAAGGCTTTGTGTGTGTTTCGAATCTCTACGACTTCGCGAAGCAAAATTCCGGACCCTTAAGATCTGCTGTTGGAACCGTCGAAGATACAGTAACTACCGTTCTAGGTCCTGTCTACAGCAAATTCAAGGGTGTCCCAAACCGTCTTCTCCTTTTTGTGGACAATAAGGTGGATGAAGCAACCCACAAATTCGATGAGCATGCACCTTCTCTGGTTAAACAAGTTGCAAGCCAAGCGAATTGTTTGGTCCAGGAAATGACAAACAAGGCTGAGAAAGTGGTGAGTGAGGCTCAATCTGGTGGGGCAAGAGCAGCAGCACAATATGTTGCCACAGAGTCAAAGAAAATTGTGGCGTTTGGTTCGGTGAAATTGTGGTGTGGTCTGAACCACTATCCACCATTCCATGCAGTGGCTGAAATGGCAGTTCCCACTGCTGCACACTGGTCAGAAAAGTACAACAATGTGGTGAAGGGAATGAGTAAAAAGGGTGGTGGTGTGTTTAGTTATTTGCCTCTGATTCCAACCGATGACATAGCCAAGGCGTTTAAGCAGGGGGGAGGCTATGTGATTGAAGATGAAGCAGGTTCTGAAGGAGAGAATTTTTCTTGA 693 0.4632 MATTTERDVENKSHEGLKHLGFVKIAAIKGFVCVSNLYDFAKQNSGPLRSAVGTVEDTVTTVLGPVYSKFKGVPNRLLLFVDNKVDEATHKFDEHAPSLVKQVASQANCLVQEMTNKAEKVVSEAQSGGARAAAQYVATESKKIVAFGSVKLWCGLNHYPPFHAVAEMAVPTAAHWSEKYNNVVKGMSKKGGGVFSYLPLIPTDDIAKAFKQGGGYVIEDEAGSEGENFS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02259 230 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Viun3g02259 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 12 213 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02259 Viun-Chr3 19594998 19596733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02259 - - gmx:100499806 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02259 3 19594998 19596733 Viun3g02259 3 19594998 19596733 ECH
Viun1g03461 1 41501825 41504008 Viun3g02259 3 19594998 19596733 PCT