Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03461 ATGGCCAAGACCGAGTTGGAGGTAACGGTTGACAGGAAGAACAAAGACCTAAAGCACCTGGGGTTTGTGAGGATTGCTGCTATTCAAACCTTTGTGTTTGTGTCAAATCTGTATGAGTACGCAAAGCAAAATTCTGGGCCTTTGAGATCTGCTGTTGGAACGGTGGAAAACACTGTAACCACCGTTCTTGGTCCAGTCTGCAACAAGTTCAAGGGCTTCCCTGATGATGTCCTGGTTTTCGTTGACAAAAAGGTGGATGAAGCTACACAGAAGTTCGATGAGCATGCTCCTCCTGTTGCTAAGCAGTTGGCGAATCAAGCGAAGGGTTTGATTCAGAAAGTGGCAAACGAGGCAGGGAAAGTTGCTGGTGAAGCTCAATCTGGGGGACCAAGAGCAGCTGTGGTTTATGTGGCTACAGAGTCAAAGCATTTTGTGTTGATAAATTCAGTGAAGTTGTGGAATGGACTGAACCACTATCCACCATTCCATGCAATTGCAGAGATGGCAGTTCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTACTGTTTCATTGGGTATCTACCCTTGATTCCCATTGATGAGATTGCCAAGGCCTTTAAGCAGGGTCAGGGGAACTTGAAAGGAGATGATGCACCCTATGTTGAAAAGAGCTCAGAGTCATCATCTGATTCTGATTGA 711 0.4627 MAKTELEVTVDRKNKDLKHLGFVRIAAIQTFVFVSNLYEYAKQNSGPLRSAVGTVENTVTTVLGPVCNKFKGFPDDVLVFVDKKVDEATQKFDEHAPPVAKQLANQAKGLIQKVANEAGKVAGEAQSGGPRAAVVYVATESKHFVLINSVKLWNGLNHYPPFHAIAEMAVPTAAHWSEKYNHVIKAMTQKGYCFIGYLPLIPIDEIAKAFKQGQGNLKGDDAPYVEKSSESSSDSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03461 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 8 231 IPR008802 -
Viun1g03461 236 MobiDBLite consensus disorder prediction 215 236 - -
Viun1g03461 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03461 Viun-Chr1 41501825 41504008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03461 - - gmx:100816931 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03461 1 41501825 41504008 Viun3g02259 3 19594998 19596733 PCT