Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02248 ATGCAAGGGAGCGAGAGGATGAAGAACCGATGGTTCATGTGGCTATTGGGGGCGTTGTGTATAATTGGAGCCACGCTCTTCATCGCTAGTTTCATGCAAACCTCTGAGAACAGTCTTCTATGCACAATAACCAGAGCGCAGCAGCGTTTAACAGGACCTCCCACATCGATGCAGCTCAGAGCGATACTTCACTACGCCACCTCGCAGATTGTGCCGCAACAGTCTCTTTCGGAGATCACCATCACCTTCGACGTCCTCCAGGCCCTTAATCGGCCCGCCAAATTCCTCATCTTTGGGCTGGGCCACGACTCCCTCATGTGGGCCGGTCTCAACGCGGGAGGCACCACGCTCTTCCTCGAGGAGGACCCTAAGTGGGTCCAGACCGTCCTCAAAGAGGCGCCGGGCCTCCGTGCCCACACCGTCCGCTACCGAACCCAGCTCCGGGAAGCCGACGAGCTCCTCTCGTCTTACCGCTCCGAGCCCGCCTGCTCGCCGGCCACTGCCACGCTCCGCGGCAACGAGCGGTGCAAGCTGGCGCTCCAGAACCTCCCGGACGAGGTGTACTCGACGGAGTGGGATCTGATCATGATCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCAGGACGCATGGCGGCGATCTTCTCGGCGGCGGTGATGGCGAGGGACAGGAAGGGCTCCGGCGTGACGCACGTGTTCCTGCACGATGTGGATCGGAAGGTGGAGAAGGCTTACGCCGAGGAGTTTCTCTGCCGGAAGCAGTTGGTCAAAGGCGTGGGCAGGCTCTGGCACTTCGAGATTCCTCCCTGGGCTAATCACTCTCGTCATGACGCGCGTTTCTGTTAG 846 0.6076 MQGSERMKNRWFMWLLGALCIIGATLFIASFMQTSENSLLCTITRAQQRLTGPPTSMQLRAILHYATSQIVPQQSLSEITITFDVLQALNRPAKFLIFGLGHDSLMWAGLNAGGTTLFLEEDPKWVQTVLKEAPGLRAHTVRYRTQLREADELLSSYRSEPACSPATATLRGNERCKLALQNLPDEVYSTEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKAYAEEFLCRKQLVKGVGRLWHFEIPPWANHSRHDARFC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02248 281 Pfam Polysaccharide biosynthesis 78 265 - -
Viun3g02248 281 NCBIfam TIGR01627 domain 60 281 IPR006514 GO:0045492
Viun3g02248 281 PANTHER OS11G0490100 PROTEIN 15 281 IPR006514 GO:0045492
Viun3g02248 281 Gene3D Vaccinia Virus protein VP39 71 277 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02248 Viun-Chr3 19381833 19383153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02248 - - pvu:PHAVU_002G173400g 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02248 3 19381833 19383153 Viun3g02248 3 19381833 19383153 ECH
Viun1g03467 1 41539295 41540961 Viun3g02248 3 19381833 19383153 PCT