LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g03467	ATGAAGAGCCGTTATCCGTTACAGGGGAAACGGTGGTTGGTGGGCCTGGCCGTGGTGGGCCTCGTTGTCGTCGGGCTTTTCCTCTCAACCACAGGCCGATCCTCGGAAACTGCTTACCTGTGTCCGGGCACGCTCGGGATCCGAACCCGAAAAGAATTCAGTTACGACCCGGCACCGATGCAGATGCGCGCCATTCTCCACTACGCGACCTCGCGCGTGGTGCCGCAGCAATCGGTGGCGGAGATCAAGGTCAGTCTTGACGTGATAAAGTCACTGGGCCGGCCATGCAACTTCCTGGTCTTCGGGCTGGGCCACGACTCCCTCATGTGGGCCTCGTTCAACCCGGGTGGCACCACGGTGTTCCTGGAGGAGGATCCGAAGTGGGTCCACTCGATCTTGAAAGACGCGCCAGGCCTGCGGGCTCATACCGTCCATTACCGTACGCAGCTTCGCGACGCCAATACGCTGCTCACCTCGTACCGCACCGAAGCCACGTGCAATCCTACGACGGCGTACCTGCGTGGCAACAAAGCGTGCAAGCTGGCGCTGGATAATCTCCCCGACGAGGTTTACGAGACGGAGTGGGACATGATCATGATCGACGCGCCCAAGGGGTACTTCGCGGAGGCCCCGGGGCGGATGTCGGCGGTGTTCTCCGCCGCTGTAATGGCGCGTAACCGGAAGGAACCCGGTGTGACGCACGTGTTCTTGCATGACGTGGATCGCAAGGTGGAGAAGCTTTACGCGGAAGAGTTTCTGTGTCGGAAGAATTTGGTGAATGGTGCTGGAAGGCTTTGGCACTTTAAGATGCCTCCTTCTAACGACACTTTCGCTTCTCGTTTCTGCTAG	849	0.5948	MKSRYPLQGKRWLVGLAVVGLVVVGLFLSTTGRSSETAYLCPGTLGIRTRKEFSYDPAPMQMRAILHYATSRVVPQQSVAEIKVSLDVIKSLGRPCNFLVFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVHYRTQLRDANTLLTSYRTEATCNPTTAYLRGNKACKLALDNLPDEVYETEWDMIMIDAPKGYFAEAPGRMSAVFSAAVMARNRKEPGVTHVFLHDVDRKVEKLYAEEFLCRKNLVNGAGRLWHFKMPPSNDTFASRFC	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g03467	282	Pfam	Polysaccharide biosynthesis	80	268	-	-
	Viun1g03467	282	NCBIfam	TIGR01627 domain	63	282	IPR006514	GO:0045492
	Viun1g03467	282	Gene3D	Vaccinia Virus protein VP39	70	279	IPR029063	-
	Viun1g03467	282	PANTHER	OS11G0490100 PROTEIN	19	282	IPR006514	GO:0045492

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g03467	Viun-Chr1	41539295	41540961	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g03467	-		-	gmx:100791951	476.092

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun1g03467	1	41539295	41540961	Viun3g02248	3	19381833	19383153	PCT