Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02246 ATGAGAGTAGTGGTAGCAGCGTTGGTGTGGGTGTTTGTGTTGGGTGTGGGGGTGTCGGAGGAAGGAGATTTGGCATCGCAGTGCAACGTGCTGGTGCAGAAAGTGCTTCCGTGTCTGAGCTTCGCGACGGGGCAGGCGGCGGTTCCGACGAAGGAATGCTGCTCGGCGACGTTGGAGATAAAGAACAGCGACCCGAAGTGCTTGTGCTTTGCGATCCAGCAGACCCATAAGGGGATCCCTGAGGCGAAGAGCATGGGCATTCAAGAGGGTAGGCTCCTTCAACTACCTTCTGCCTGTAACTTGAAGAACGCCAGCACCACCAATTGTCCTAAGCTTCTGGGCCTATCTCCAAACTCACCTGACGCTGCCATATTCCGGAATGGCACGTTGAGAATTAATTCGACTTCAACGTTGGGAACTACAAGACCAGTCTCAGACACCCACAAGGCATCGTTTGGGACCATGCTTCCACCTCCTCTCGCGCCACCACACCTTGCTGCACTGCTTTGCGCCATTCTCCTCCTTCTCACAACGTTAATTTAA 543 0.5414 MRVVVAALVWVFVLGVGVSEEGDLASQCNVLVQKVLPCLSFATGQAAVPTKECCSATLEIKNSDPKCLCFAIQQTHKGIPEAKSMGIQEGRLLQLPSACNLKNASTTNCPKLLGLSPNSPDAAIFRNGTLRINSTSTLGTTRPVSDTHKASFGTMLPPPLAPPHLAALLCAILLLLTTLI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02246 180 Pfam Probable lipid transfer 12 109 IPR016140 -
Viun3g02246 180 CDD AAI_LTSS 35 101 - -
Viun3g02246 180 Gene3D - 25 107 IPR036312 -
Viun3g02246 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 109 IPR036312 -
Viun3g02246 180 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 143 IPR043325 -
Viun3g02246 180 SMART aai_6 28 109 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02246 Viun-Chr3 19374415 19375613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02246 26 137 Acyl Lipid Metabolism Gene Families AT1G27950 56.250 5.30e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02246 - - gmx:100799403 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02246 3 19374415 19375613 Viun3g02246 3 19374415 19375613 ECH
Viun1g03468 1 41546394 41548249 Viun3g02246 3 19374415 19375613 PCT