Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03468 ATGAAGCGGCAGAGCAGAGTGTTTGCGGTGATGTTTGTGGTGGCGGTGGCATGGTGTGCGGTGGAAGGCGCCGATGAAATGGCGACCAAGTGCGGGAAGGTGATTCAGGATGTTATTCCGTGTATGGGTTTCGCTTCGGGGAAGGAAGCGAAACCGGCGGAGAAATGCTGCGACGCAACCTCGAGCATAAAGCAGAGCAACCCAGAGTGTTTGTGCTACATCATTCAACAGGTCCACAAGGGTAGTCCAGAGGTCAAACAAATGGGGATTCAAGAGGACAAGTTGCTTCAACTCCCTTCCCTCTGTAGCGTCAAGAACGCCAGCATCACCGACTGTCCCAAGCTTCTGGGTCTAGCACCAAATTCCCCTGATGCTGCGATTTTCACGAACTCTTCGAAGGTAACTCCTGCAACATCGAACACACCAAGTACGACCCCACAAAGCCAAAACGCATCGCATGGAAGTATGGTTGTACCTAGTATTCCGATGCTGATAAGTTTGACCGTTGTTCTGGTTGCAATTTCACCGGTTTTTGTGAGCATTTATACATGA 552 0.5054 MKRQSRVFAVMFVVAVAWCAVEGADEMATKCGKVIQDVIPCMGFASGKEAKPAEKCCDATSSIKQSNPECLCYIIQQVHKGSPEVKQMGIQEDKLLQLPSLCSVKNASITDCPKLLGLAPNSPDAAIFTNSSKVTPATSNTPSTTPQSQNASHGSMVVPSIPMLISLTVVLVAISPVFVSIYT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03468 183 CDD AAI_LTSS 40 104 - -
Viun1g03468 183 MobiDBLite consensus disorder prediction 132 152 - -
Viun1g03468 183 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 112 IPR036312 -
Viun1g03468 183 SMART aai_6 31 112 IPR016140 -
Viun1g03468 183 Pfam Probable lipid transfer 17 112 IPR016140 -
Viun1g03468 183 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Viun1g03468 183 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Viun1g03468 183 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Viun1g03468 183 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 161 IPR043325 -
Viun1g03468 183 Gene3D - 28 109 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03468 Viun-Chr1 41546394 41548249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03468 30 178 Acyl Lipid Metabolism Gene Families AT1G27950 45.333 8.03e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03468 - - gmx:100305718 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03468 1 41546394 41548249 Viun3g02246 3 19374415 19375613 PCT