Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00470 ATGGCAGAAAAAAGGTTAATCGTAGAAGTGGAGAAAGCCAAAGAGGGCACAGAAGAAAAGCCATCAATGGGTCCTGTCTATCGTAGCGTTTTCTGCAATGATCCAACTCCTCCTGCCATACAAGGTCTTGATACATGCTGGGATATTTTTAGGATGTCGGTGGAGAAATATCCTACAAAGACAATGCTTGGTGTTCGTGAAATTGTGGATGGGAAGCCTGGCAAGTATAAGTGGCAAACTTACCAAGAGGTTTACGACATGGTGGTCAAGGTTGGAAATTCCATTCGTGCTTGTGGTTATGGGGAGGGAGTAAAATGTGGTATTTATGGTGCCAATAGCCCAAAATGGATTATGAGCATGCAGGCCTGCAATGCTCATGGACTTTACTGTGTTCCTTTATATGATACCTTGGGTTCTGGGGCTGTGGAATTTATTATAAGCCATGCAGAGGTCTCAATTGCTTTTGTTGAAGAAAAGAAGATACCCGAGCTGTTGAAGGCATTTCCAAACGCAGCAAACTTCGTCAAGACAATTGTGAGTTTTGGAGATGTTACCCCTGAACAAAGGCAACAAGTTGAACAGTTTGGATTGACCATGTATTCATGGGAGGACTTTTTGAAAGTGGGTCATGATCAGACTTTTGAGCTTCCTGAGAAAAAGAAAAGTGATGTATGTACAATAATGTATACCAGCGGAACTACTGGTGACCCTAAGGGTGTATTGATATCCAATGAAAGCATTATTACACTTTTAGCTGGGATTGATAAAGTTCTGATCAGTTGCCATGAGAAATTGAGTGACAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGACAGGGTCATTGAGGAGGCAATGATAATGCATGGTGCCTCAATAGGTTTCTGGCGTGGAGATGTCAAATTGTTACTAGAAGACATTGCGGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCTCGTGTGCTTGATAGAGTGTACAGTGGTTTGAATCAGAAGATTTCTACAGGGGGCTTTATGAAACAGACAGTGTTCAATTTCGCCTACTCATACAAGATGCATAGCTTAGGTAAAGGGCGAAATCATGAGGAAGCATCTCCACTATTTGATAAAATTGTATTTAATAAGGTAAAGCAAGGTTTAGGGGGAAGGGTACGTATTATTTTGTCTGGAGCAGCACCTCTATCTAAACATGTTGAAGGTTATCTGCGGGTGGTGACTTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCGGGAACCTTTGTGTCATTACCGAACGAAAAGGACATGCTTGGCACCGTGGGGCCTCCTGTACCATATGTGGATGTGTGCCTAGAATCTATTCCTGAAATGGGATACGATGCGCTTGGAGACCCACCAAGAGGAGAAATATGTGTGAGGGGAAGTACTGTGTTCAAAGGGTACTACAAACGTGAAGACCTAACCACAGAGGTTATGACCAATGGCTGGTTCCACACAGGTGATATTGGAGAGTGGCAACCTAATGGAGCCATGAAAATTATTGATAGGAAAAAAAATATATTCAAGCTTTCACAAGGAGAATATGTTGCCGTTGAACACCTGGAGAACATTTATGTTCAAGCTTCTGTCGTTGATTCTATATGGATTTATGGAAATAGTTTTGAGTCATACTTAGTTGCTATTGTTAACACCAACAAGCAAGCAATTGAAAAATGGGCCGAAGAAAATCGTATAACCGCAGACTTTGATTCTCTCTGTGAAGATTCTAGAACAAAAACTTACGTAATTGGAGAGCTCGCCAAGATTGCAAAGGAAAAGAAGTTAAAAGGTTTTGAGTTTATTAAAAGTGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCGACATTTAAGAAGAAAAGACCAGAACTGCTTAAATACTATCAGAATACCATTGACGAAATGTATAAAGCACTGAACGCAAGCAACAAATCCAGTGCCTGA 1998 0.4124 MAEKRLIVEVEKAKEGTEEKPSMGPVYRSVFCNDPTPPAIQGLDTCWDIFRMSVEKYPTKTMLGVREIVDGKPGKYKWQTYQEVYDMVVKVGNSIRACGYGEGVKCGIYGANSPKWIMSMQACNAHGLYCVPLYDTLGSGAVEFIISHAEVSIAFVEEKKIPELLKAFPNAANFVKTIVSFGDVTPEQRQQVEQFGLTMYSWEDFLKVGHDQTFELPEKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIDKVLISCHEKLSDKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVKLLLEDIAELKPTIFVAVPRVLDRVYSGLNQKISTGGFMKQTVFNFAYSYKMHSLGKGRNHEEASPLFDKIVFNKVKQGLGGRVRIILSGAAPLSKHVEGYLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVCLESIPEMGYDALGDPPRGEICVRGSTVFKGYYKREDLTTEVMTNGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEHLENIYVQASVVDSIWIYGNSFESYLVAIVNTNKQAIEKWAEENRITADFDSLCEDSRTKTYVIGELAKIAKEKKLKGFEFIKSVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNTIDEMYKALNASNKSSA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00470 665 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Viun3g00470 665 SUPERFAMILY Acetyl-CoA synthetase-like 40 656 - -
Viun3g00470 665 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Viun3g00470 665 Gene3D - 41 516 IPR042099 -
Viun3g00470 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 654 - -
Viun3g00470 665 Pfam AMP-binding enzyme 51 524 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00470 Viun-Chr3 2797490 2803904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00470 3 663 Acyl Lipid Metabolism Gene Families AT4G23850 69.440 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00470 K01897 - gmx:100811306 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02668 2 32252453 32261976 Viun3g00470 3 2797490 2803904 PCT