Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02668 ATGGCACAGAAGAGTTACATCGTTGAGGTCGAGAAAGCGAAGGAGGCGAGTGAAGGAAGGCCATCCAGAGGACCCGTGTACCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTATCGAAGGCCTCGATTGCTGCTGGGACGTTTTCCGATTGTCTGTTGAGAAATACCCAACTAGTCCAATGCTTGGTCGCCGGGAAATTGTGGATGGGAAGGCAGGTAAGTACAAGTGGTTAACATACAAAGAAGTATATGACCAGGTGATTAAAGTTGGGAATTCCATCCGTAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCAGCAGAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTCTATTGTGTACCTTTATATGATACCTTGGGTGCTGGAGCTGTAGAATTTATTATAAGCCACGCAGAGGTCTCAATTGCATTTGCGGAAGAAAAGAAGATACCCGAGCTACTGAAGACATTTCCAAATGCAACAAAGTATCTCAAGACTATTGTAAGCTTCGGAAAGGTTACACCTGAACAAAGGCAAGAAGTTGAGAAGTTTGGGTTGGTAATATATTCGTGGGATGAATTTTTACAAGTGGGTCAAGATCAGAGTTATGATCTTCCAATTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTAGCTGGTGTTAAGCGACTGTTGGAGAGTGTCAATGAACAATTGAGTGAGAAGGATGTATACATATCATACCTGCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAAACATTCATATGGCATGGTGCTTCAATAGGTTTTTGGCGTGGGGATGTCAAATTGCTAATTGAAGATATTGGGGAACTAAAACCAACTGTTTTCTGTGCTGTTCCCCGTGTGCTCGATAGAGTGTACTCAGGTTTGACACAGAAGATTGCTTCTGGGGGCTTCTTGAAGAAGACATTATTCAACTGTGCTTATTCATACAAGCTGAATAACATGAAGAAAGGGTTTACACATGGAGAGGCATCCCCTATTTGTGATAAAATTGTATTTGATAAGGTAAAACAGGGTTTAGGAGGTAGAGTTCGTCTTATTTTGTCTGGAGCAGCACCTTTATCTGCACATGTGGAAGGTTACTTACGGGTGGTGACTTGTTGTCATGTCCTACAAGGATATGGCCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACAGTGGGCCCTCCAGTACCAAATGTTGATGTTTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGGGGAGAGATTTGTGTAAAGGGTAAAACCTTGTTTTCAGGTTACTACAAACGTGAAGATCTCACCAAAGAGGTTCTGATCGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAAAAGAATATATTCAAACTTTCACAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAACATTTATGGTCAAGTTTCCTGTATCGAATCTATATGGGTTTATGGAAACAGTTTTGAAGCCTTCCTTGTTGCTGTTGTTAATCCCAGAAAGGAAGCACTTGAACAATGGGCACAAGAAAATGCTATATCCAAGGACTTCAATTCTCTCTGTGAAGATGCTAGAGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATCGCAAAGGAAAAAAAGTTGAAAGGTTTCGAGTTTATAAAAGGAGTTCATCTTGACCCGATTCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCACAGTTGCTTAAATTTTATCAGAGTGCTATTGACAACATGTACAAGAGTGCAAAGTAA 1977 0.4148 MAQKSYIVEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIEGLDCCWDVFRLSVEKYPTSPMLGRREIVDGKAGKYKWLTYKEVYDQVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIISHAEVSIAFAEEKKIPELLKTFPNATKYLKTIVSFGKVTPEQRQEVEKFGLVIYSWDEFLQVGQDQSYDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQLSEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTVFCAVPRVLDRVYSGLTQKIASGGFLKKTLFNCAYSYKLNNMKKGFTHGEASPICDKIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVTCCHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSCIESIWVYGNSFEAFLVAVVNPRKEALEQWAQENAISKDFNSLCEDARAKSYILEELSKIAKEKKLKGFEFIKGVHLDPIPFDMERDLITPTYKKKRPQLLKFYQSAIDNMYKSAK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02668 658 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Viun2g02668 658 Gene3D - 43 516 IPR042099 -
Viun2g02668 658 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Viun2g02668 658 Pfam AMP-binding enzyme 67 524 IPR000873 -
Viun2g02668 658 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Viun2g02668 658 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02668 Viun-Chr2 32252453 32261976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02668 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 75.994 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02668 K01897 - gmx:100814965 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02668 2 32252453 32261976 Viun2g02668 2 32252453 32261976 ECH
Viun2g02668 2 32252453 32261976 Viun3g00470 3 2797490 2803904 PCT