Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00461 ATGTCTGTTTCACAATTAGTGCGACAATTAGACTTGCGGAACAAAGATGCGCTGGATAAAGTTTTTGCAAAACAAAAGTTTGATGCTGTCATACATTTTGCTGGGCTGAAAGCAGTCGGTGAAAGTGTGCACAAACCACTAATATACTTTGACAACAACTTGATTGGGACAATAATTCTATTTCAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCAACTGTATATGGCTGGCCAAAGGAGGTTCCATGTACCGAAGAATTCCCTTTGAAAACGACAAACCCATATGGAAGGACCAAGCTTATCATCGAAGAGATGTGTCGTGATCTCCACGGTTCGGATTCAGATTGGAAAATTATACTGTTGAGATACTTTAATCCAGTTGGTGCGCATCCTAGTGGTTTTATTGGTGAGGACCCTCGTGGAATTCCGAACAATCTCATGCCCTTTGTTCAACAAGTGGCAGTTGGCAGACTCCCTGCACTGACAGTTTTTGGAAACGATTATAAAACATGTGACGGCACTGGAGTTCGCGATTTCATTCATGTTGTTGACTTAGCAGATGGGCACATTGCTGCTTTGCGTAAACTGGATGATCCTAAAATAGGTTGTGAAGTTTATAACTTGGGAACAGGAAAAGGAACATCAGTTTTGGAGATGGTAAAGGCTTTTGAAAAGGCCTCTGGAAAGAAAATTCCACTTTCAATGGGTGATCGTAGACCTGGAGATGCTGAAATTGTTTATGCTTCAACGAACAAAGCGGAAAAAGAACTTAATTGGAAGGCTAAACACGACATCCATGATATGTGTCGGGATCAATGGAACTGGGCTAGCAAAAACCCTTATGGCTATGGTAAATCTGGAGATTCCTCTAAGTGA 894 0.4183 MSVSQLVRQLDLRNKDALDKVFAKQKFDAVIHFAGLKAVGESVHKPLIYFDNNLIGTIILFQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLKTTNPYGRTKLIIEEMCRDLHGSDSDWKIILLRYFNPVGAHPSGFIGEDPRGIPNNLMPFVQQVAVGRLPALTVFGNDYKTCDGTGVRDFIHVVDLADGHIAALRKLDDPKIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLSMGDRRPGDAEIVYASTNKAEKELNWKAKHDIHDMCRDQWNWASKNPYGYGKSGDSSK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00461 297 Gene3D - 8 222 - -
Viun3g00461 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 288 IPR036291 -
Viun3g00461 297 Gene3D - 141 282 - -
Viun3g00461 297 CDD UDP_G4E_1_SDR_e 9 281 IPR005886 GO:0003978|GO:0006012
Viun3g00461 297 PRINTS Nucleotide sugar epimerase signature 183 198 - -
Viun3g00461 297 PRINTS Nucleotide sugar epimerase signature 209 224 - -
Viun3g00461 297 PRINTS Nucleotide sugar epimerase signature 248 265 - -
Viun3g00461 297 PANTHER UDP-GLUCOSE 4-EPIMERASE 7 291 - -
Viun3g00461 297 FunFam UDP-glucose 4-epimerase 4 225 292 - -
Viun3g00461 297 NCBIfam UDP-glucose 4-epimerase GalE 9 287 IPR005886 GO:0003978|GO:0006012
Viun3g00461 297 Pfam GDP-mannose 4,6 dehydratase 8 277 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00461 Viun-Chr3 2746959 2750982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00461 6 281 Miscellaneous Gene Families AT4G00110 25.939 1.77e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00461 K01784 - gmx:100812565 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02680 2 32325475 32329551 Viun3g00461 3 2746959 2750982 PCT