Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02608 ATGAAAGAATCGGAGAAAGTAACGTGGGATCAAGGTCGATGTCCGGCGCAGGCACGATCCTCAAGCTCACACAAACTTATGGTATGGCTAATGCTCTTCGTTTCGCTCATCTACATGCTTTATACTCTCAAGCTCGTGTCCACATCGTCTCGGGACTGTAACCACGCGCCTTTCATCATCAACCACCTCTCTTCTTCTTCCTCTTTCCCCAACGCAAACGTCACGGGGAAAAGGGAATCCTCCTCCGCAACGGGGAAGCGCCGCGACCAGAAAACGGAGCTCCGTCACGTGGTGTTCGGAATCGCGGCGTCGTCCAAGCTGTGGGAGCACAGAAAGAATTACATAAAGATTTGGTACAGGAAGAAGGAGATGAGGGGAGTGGTGTGGCTGGACGATCGCGTGAAGATCGACCCGGAGGAAGGGTTGCCGCCGGTGAAGGTTTCAACGGACACCTCTAATTTTGTTTACACCAACAAGCTGGGTCACCGCTCCGCCATTCGGATCTCCCGCATCGTGACCGAAACGCTGCGTCTGGGGCTGAAGGATGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTGAGCGACAACCTGCTGAAGATTCTGAACAAGTACGACCACAACCACATGTACTACATTGGGAGCTTGTCGGAGAGTCACTTGCAGAACATATTCTTCTCCTACGGCATGGCCTACGGCGGAGGGGGCTTCGCCATCAGCTACCCCTTGGCCAAAGCCCTGAGCAAGATTCAAGACCGTTGTATTCAGAGGTACCCTTCTCTTTATGGCTCCGATGATCGAATGCAAGCTTGCATGGCTGAACTCGGTGTTCCACTCACCAAGGAACTCGGTTTTCACCAGTACGATGTTTATGGGAACCTGTTGGGGCTTCTTGCGGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCGAACGTTACCAGAATCGAAGCCCTTCAACGGCTAACCATTCCGATGAAGCTTGACTCGGCATCGCTGATTCAGCAATCAATTTGCTACGACAAGAAAAGAAAATGGACGGTTTCAGTTTCATGGGGTTTTGCCGTTCAAATATTTCGCGGGATATTCACACAGAGGGAGATGGAAATGCCTTCCAGAACATTCCTGAATTGGTACAGAAGAGCAGATTACACTGCATATGCGTTCAACACACGACCGGTTAGCAGAAACCCATGTCAGAAGCCTTTCGTGTTTTACTTCTCAAAGGCAAAACTCAATTCCACATTGCAACACACAGTGACTGAATATGAAAGACACCTTGTTCCTCACCCAGAATGTCACTGGAAAATGCCTGATCCTTCTCAGCTTCTAAAAGTAGAGGTGCACAAGAAGCCAGACCCGCATCTATGGGATAGGGCACCAAGGAGAAATTGTTGCAGAGTGATGAAGACCAACAAGACAGGAATGATGAAGATAGATGTGGGTATATGCAGAGATGGCGAGATCCACGAACCTCTTTCATTGTGA 1521 0.5023 MKESEKVTWDQGRCPAQARSSSSHKLMVWLMLFVSLIYMLYTLKLVSTSSRDCNHAPFIINHLSSSSSFPNANVTGKRESSSATGKRRDQKTELRHVVFGIAASSKLWEHRKNYIKIWYRKKEMRGVVWLDDRVKIDPEEGLPPVKVSTDTSNFVYTNKLGHRSAIRISRIVTETLRLGLKDVRWFVMGDDDTVFVSDNLLKILNKYDHNHMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKIQDRCIQRYPSLYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLLGLLAAHPVTPLVSLHHLDVVEPIFPNVTRIEALQRLTIPMKLDSASLIQQSICYDKKRKWTVSVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKLNSTLQHTVTEYERHLVPHPECHWKMPDPSQLLKVEVHKKPDPHLWDRAPRRNCCRVMKTNKTGMMKIDVGICRDGEIHEPLSL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02608 506 FunFam Fringe-related protein-like 84 338 - -
Viun2g02608 506 Pfam Protein of unknown function, DUF604 224 477 IPR006740 -
Viun2g02608 506 Gene3D - 84 342 - -
Viun2g02608 506 PANTHER FRINGE-RELATED 24 500 - -
Viun2g02608 506 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02608 Viun-Chr2 31920802 31924986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02608 4 502 Glycosyltransferase AT4G23490 65.451 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02608 - - gmx:100801444 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02608 2 31920802 31924986 Viun2g02608 2 31920802 31924986 ECH
Viun2g02608 2 31920802 31924986 Viun3g00542 3 3303219 3306676 PCT