Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02582 ATGGGATCCCTCAATCTGAAATGGGCTTCAGGGTGCTTGGCTTTGGGGAAGGTAGAGTCAAGTAAAACTACTCTGAGAGGTAGTTATGCGTACGATAAGTTCAAGCGCAAAGAGAAAGGACAAAGATCTGTGATTGTTGCTACGGGACCAGCCATAGACCATGCTCCTGCTATTGCCGAAGAACCCTTGACAAAAGAACATCTTATTCACTACATGGCATCTGGTTGCAAGCCCAAGCAAAATTGGAGAATAGGTACAGAGCACGAGAAGTTTGGCTTTGAGCGTAAGACTTTGCGTTCCATTAATTACGAACAGTTATCAGCTTTACTCAATGGCATTGCTGAGAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTAAGAAATGACAAGCAAAACATATCATTAGAGCGTGGTGGTCAGTTTGAGCTCAGTGGTGCGCCTTTGAAAACATTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCCAAAACTGTTGCAGATGAAATGGGAATTGCTTTTATGGGATTAGGTTATCAACCTAAATGGAAATTGGAAGACATAGTTAGAGTGCCTAAGGAACGGTACAACATTTTACAGAATCAGTTATGCAAATTTGGCTCGCCTGGAGTTGAAATATTGATCATGACATGCTCAGTTCAGGTCAACCTGGATTTCAGTTCGGAAGCAGACATGGTCAAGAAAATGCGTGCCGGAATTGCTTTGCAGCCTTTAGCAGCAGCCTTATTTGCTAATTCACCTTTCAAGGATGGGGTTCCAAGTTCTTATCTCACCACAAGAGGCCATATTGGTGAGTTTGACAAACATCGCACTGGCATACTCCCTTTTGTTTTTTATGACAATTTTGGGTTTGAGCAGTATGTTGATTACGCCCTTGATGTGCCAATGGTGTTTGCTTATCGAGAAAACAAGTACATTGACTGTCGTGATATGTCATTCCGGGACTTCATCGCAGGTAAACTCCCAGCCATTCCAGGTCAAGTGCCAACACTAGCTGACTGGGAAAATCATCTAACAACCATATTCCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATAATGGCCCTATTGACATGATATGCGCTGTCCCTGCTTTTTGGGTAGGCTTACTGTATGATGAGGTTTCACTGCAAAATGTTGTGGATATGATTGCTGATTGGACCCCTGAAGACATACAGAATTTAAGGGATATGGCTCCCATAACTGGATTAAGGACTCAAGTTCGAGGTAGATTGTTGAGACATATTGCAGAAGAGGTGTTGAAGTGGGCAAAGGAAGGTTTGGACAGAAGATGCTTGAGTGAATCCGTTTTCTTAGATCCATTGAAGGAAGTGGTTGAGACAGGTTTGACCCAAGCCCACAAGCTGTTGGAGTTGTATCATACGAAGTGGGGAAACAACGTAGATCATGTGTTCAGAGAGTGCTGCTACTAA 1488 0.4281 MGSLNLKWASGCLALGKVESSKTTLRGSYAYDKFKRKEKGQRSVIVATGPAIDHAPAIAEEPLTKEHLIHYMASGCKPKQNWRIGTEHEKFGFERKTLRSINYEQLSALLNGIAERFDWEKIMEGDNIIGLRNDKQNISLERGGQFELSGAPLKTLHQTCDEINSHLYQAKTVADEMGIAFMGLGYQPKWKLEDIVRVPKERYNILQNQLCKFGSPGVEILIMTCSVQVNLDFSSEADMVKKMRAGIALQPLAAALFANSPFKDGVPSSYLTTRGHIGEFDKHRTGILPFVFYDNFGFEQYVDYALDVPMVFAYRENKYIDCRDMSFRDFIAGKLPAIPGQVPTLADWENHLTTIFPEVRLKRYMEMRGADNGPIDMICAVPAFWVGLLYDEVSLQNVVDMIADWTPEDIQNLRDMAPITGLRTQVRGRLLRHIAEEVLKWAKEGLDRRCLSESVFLDPLKEVVETGLTQAHKLLELYHTKWGNNVDHVFRECCY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02582 495 Gene3D - 48 495 - -
Viun2g02582 495 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 36 495 IPR035434 GO:0004357|GO:0006750
Viun2g02582 495 NCBIfam glutamate--cysteine ligase 62 495 IPR011556 GO:0004357|GO:0006750
Viun2g02582 495 Pfam Glutamate-cysteine ligase family 2(GCS2) 114 405 IPR006336 GO:0004357|GO:0042398
Viun2g02582 495 PIRSF GCL 50 495 IPR035434 GO:0004357|GO:0006750
Viun2g02582 495 SUPERFAMILY Glutamine synthetase/guanido kinase 74 489 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02582 Viun-Chr2 31825287 31828994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02582 K01919 - gmx:100775188 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02582 2 31825287 31828994 Viun3g00585 3 3615473 3622940 PCT