Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02560 ATGGCGTTTCAGGAAAAGGGAAACAGGTCTAAGAGGCAGCCAGAGAAGAATCCCTCTGCTTCAAACAATGGAAGAATTCCAGGTGCTGTCAAATTCTCTAACGACACGGAAAGACTTCAACATGTCAATAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTTCTTTTCGAGACCCGGAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTATGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGAGAAAAAACCCAAAAATTAGATATGATGGGGAAAAATTCTCTTACAAGTCCAAGCATGATGTTAGGGACAAAAGTCAGCTGCTTGTCCTGGTGCGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCTAACTTTGACTCACAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGGAGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCCCAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAAATGA 774 0.4251 MAFQEKGNRSKRQPEKNPSASNNGRIPGAVKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKIRYDGEKFSYKSKHDVRDKSQLLVLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFREIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFQNLK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02560 257 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Viun2g02560 257 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 10 257 IPR016656 GO:0005673|GO:0006367
Viun2g02560 257 MobiDBLite consensus disorder prediction 1 29 - -
Viun2g02560 257 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
Viun2g02560 257 MobiDBLite consensus disorder prediction 208 257 - -
Viun2g02560 257 MobiDBLite consensus disorder prediction 14 29 - -
Viun2g02560 257 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02560 Viun-Chr2 31693034 31696671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02560 K03137 - gmx:100788089 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02560 2 31693034 31696671 Viun3g00613 3 3771106 3774076 PCT