Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02557 ATGGGTAAAGCTCAACGTAAAATGTCTGAAGCAACCAATAGACAGATCAGCAATAGCACAAAATGCAATTCCAAACAGACCGTGGAAAAATCAGATGAACATCCTGAATGGTTACCTGATGGTTGGATTGTGGACTCCAAAACTCGAAAAAGTGGTGCATATATGGGATGTGGGTATAAGTGTTACATTGATCCAACTGGACGCAAATTCTACTCCAAACCAGAGGTATTACGCTATCTTGAGACTATAAACATCAACAGTCACAGTTCCAAGAAGGAAAAGATGCGCAAAAGCAATGATGCTGTCGAGAAGTCCCCAGTTGAGGATTTACCACCTGGCTGGACAATAGAAACCAAGGTTAGGAAGGGTGGTACTGGCAATAGGAAAGATCTGTTTTATATAGATCCGGTGGGTGGATATGTATTTCGCTCCAAGAAGGATGCACTACGCTATGTTAAGTCTGGTGATATAAGTGTGTGTGTGGTTAAACCGTATAAGCAACAAATCCAAGATCAAGACAAAGTATCTAATGCAGATGAGAAGTCCACTATACAGGATTTACTACCTGGGCAGATGACAGAAGTCAAAATTAGGAAGGGCAGTAGTGACAAAAGGATAGATCCGGATTCCGTCGAGAAGTCCCAAGTTGAGGATTTACCACCCGGGTGGATAACAGAAGCCAAGGTTAGGAAGGGTGGTAGTGGCAAGAAGAAAGATCTGTTTTATTTAGATCCAGTGAGTGGATATGTATTTCGGTCCAAGAAGGATGCACTGCGCTATGTTAATTCTGGCGATATAGATACGTGCGTGATTAAACCATATAAAAGAGGAATCCAAGATGAAGACAGAATAAGTCCATCATCTATTGGCAAAAAGCAGAAGCTAAAGCAGTCTGCCGCAAATCAACAGCTTTCTGTAGGTGAATCTGATGTGAAGAGCCAATCGTTAGAGCATGCAACTGTACACAGTCCTGAAATGATGAAAACATTTGATTCAGATGATGTGCTAGAGAAGGACCACTTTGAGAATATGATGGAGCATGCTAGTGAAAAGAATCACAGCAACCGTAGTTTATCCAAAACCAAAGAGTCCAATGTGGCTCGCCGTTTTTCACGGAGACTTTCTGGGGCTGAACCTGACCATTTGACCTACGTGCCCAATGAACAGGCTCTTCAAGTTCCTAAAAGAAAGTTGGGAAAAAATATAAGTATTTTAGACACTGATTTGACAAATAAATCATCTCAGCAGCTGAGTGGTGTACTGGAAACTGAGCGTTCATATAAAGAGCAAGAAGAAGTGCAATTGAACTCAAACAAATCCAGAACCAAGGAAGAGAAACAAATTTTTTATCGTTCTTCAAAACGATTAGCTGAATCTGAACCGAAGCTGATGAGCAACTCTAGTTCCCACAAAACATCTTATAAAAGTAAAAGGTCTAAAGGTGATGCCAAAGCAACCTTGCAGCAAAGTGATGGTCAGCCAGTTACGGAGTTTGCAGCATCAACAAATGGAAATAAAGGCAAAAAACTTCCCGAAGCCACACCCATAACTAGCAATCAACTGAAGAAATTTGATGACCAAGAAATAAATAACGATGAGAAATCAGAACTTGAGCAATCCTTTGCATTTCATTATTCTTGGTCTGATCCATGCTTGGAATTTGCAATTCAGACCCTGACAGGTGCATTACCAGTTGAAGATTCAACTGACAATGGAGAAGCCAGGGTTTCTGAAACAGATACATCTCCCAAAAATAAGTCGGTTGAGAATGTTACAGGAAGCAGCAATGACAAAACCTCACGTGTAAATTCAAAGAAATCCAAGAACAAAAAAGAGCTTACAGTGCCAAGGCGGTTGTCAAAGCGACTTGCTGGCAATGAATCCGAGGTACTTCCTACTGAAAAAGCTGCTGAATTCGCCCCTCAGAAGTCGTGCAATGACAAACTAGCTGCTACTGCGAGTTTAACTAATGGAGTGTCTGGGCATCTTCGTGACAGGGAAGAATCCGAACTTGTTGTCCAGGCATCTGACAGGTTGAAAACATTATGTGGTGAATCATTGATCAAGAATGAGAAGTCATATGATGCCCAAACGGTTCCCAATGAACAAATGCAGAGTTATGAAGAGGAAAATGCCGATGATGAAAGATCGTATTCACAGTTCCCCACACCTTTTGGGGACTCCTGGTCGGATCCTTGTCTAGAATTTGCAATTAAGACTCTTTCAGGTGCTTTGCCAGTTGACGCACCAACTGCGGACATTTTACCTGTTGTTACTCCTGATGTTAGTGACCCCCCAAATAAGGAGTCACTTCAGAGTATGGAGCAGAAGAGCATGAATGCAGAAACTCATGATAATCCCTACCAATCCCAGACCAAGAATGAGTTTAATACTGTTTGCCACACATCAAAACAAGACCTGAACCAGCCCGAGGTGACCACCTACTCCACATCTTTTGGAAATGATCCAAAGTTTGCAACTAGAGAGTCTTACAAGGATGGAGACAGTATAACCAGGAATTCTAATGGAAGAGAACCCGAACGTATTAAATCTGGGAACGCACTAGAAATTGATATTAACAAAACAATTCTTGAAGAAGAACCACAACCTGCAACAATAAACTACGATAATTCTGACAGAGAATTCGCTGCTTCATTTATGGATTCTTGGTCAGATCCATGCCTAGAATTTGCATTTGATACTCTTTCAGGCGCAATACCAGTAGAGGAAAATATAACAATTCAAGCATGTTTCCAGGAACGTGCCCATAGCCATGGCCAAAGAGGGGGTTTCTCGACAGTACCAGATTTTGGATTTTCCAATAGTGGTATCTCATTTCACAATAATATAGAGGAGAAATCCAAGTCAGTTCAACAGTCATCAGCGAGTTCTTCTTTCCTCCCCCAGGAAAAACAAGGTCTGGGCGCTTTCTACGGGGTTGATCCTCAAGAACAATACTTTCAGAATAGTAATAATTTTCAGAGAAAGTGA 2991 0.4142 MGKAQRKMSEATNRQISNSTKCNSKQTVEKSDEHPEWLPDGWIVDSKTRKSGAYMGCGYKCYIDPTGRKFYSKPEVLRYLETININSHSSKKEKMRKSNDAVEKSPVEDLPPGWTIETKVRKGGTGNRKDLFYIDPVGGYVFRSKKDALRYVKSGDISVCVVKPYKQQIQDQDKVSNADEKSTIQDLLPGQMTEVKIRKGSSDKRIDPDSVEKSQVEDLPPGWITEAKVRKGGSGKKKDLFYLDPVSGYVFRSKKDALRYVNSGDIDTCVIKPYKRGIQDEDRISPSSIGKKQKLKQSAANQQLSVGESDVKSQSLEHATVHSPEMMKTFDSDDVLEKDHFENMMEHASEKNHSNRSLSKTKESNVARRFSRRLSGAEPDHLTYVPNEQALQVPKRKLGKNISILDTDLTNKSSQQLSGVLETERSYKEQEEVQLNSNKSRTKEEKQIFYRSSKRLAESEPKLMSNSSSHKTSYKSKRSKGDAKATLQQSDGQPVTEFAASTNGNKGKKLPEATPITSNQLKKFDDQEINNDEKSELEQSFAFHYSWSDPCLEFAIQTLTGALPVEDSTDNGEARVSETDTSPKNKSVENVTGSSNDKTSRVNSKKSKNKKELTVPRRLSKRLAGNESEVLPTEKAAEFAPQKSCNDKLAATASLTNGVSGHLRDREESELVVQASDRLKTLCGESLIKNEKSYDAQTVPNEQMQSYEEENADDERSYSQFPTPFGDSWSDPCLEFAIKTLSGALPVDAPTADILPVVTPDVSDPPNKESLQSMEQKSMNAETHDNPYQSQTKNEFNTVCHTSKQDLNQPEVTTYSTSFGNDPKFATRESYKDGDSITRNSNGREPERIKSGNALEIDINKTILEEEPQPATINYDNSDREFAASFMDSWSDPCLEFAFDTLSGAIPVEENITIQACFQERAHSHGQRGGFSTVPDFGFSNSGISFHNNIEEKSKSVQQSSASSSFLPQEKQGLGAFYGVDPQEQYFQNSNNFQRK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02557 996 MobiDBLite consensus disorder prediction 424 458 - -
Viun2g02557 996 SUPERFAMILY DNA-binding domain 109 157 IPR016177 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 601 624 - -
Viun2g02557 996 Gene3D - 191 309 - -
Viun2g02557 996 Gene3D - 1 98 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 757 789 - -
Viun2g02557 996 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 100 172 IPR001739 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 583 600 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 281 313 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 89 110 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 347 368 - -
Viun2g02557 996 SUPERFAMILY DNA-binding domain 217 266 IPR016177 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 826 847 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 413 533 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 26 40 - -
Viun2g02557 996 SUPERFAMILY DNA-binding domain 31 87 IPR016177 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 8 25 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 699 718 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 89 104 - -
Viun2g02557 996 Pfam Methyl-CpG binding domain 33 82 IPR001739 GO:0003677
Viun2g02557 996 Pfam Methyl-CpG binding domain 110 155 IPR001739 GO:0003677
Viun2g02557 996 Pfam Methyl-CpG binding domain 218 264 IPR001739 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 814 847 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 485 503 - -
Viun2g02557 996 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 209 281 IPR001739 GO:0003677
Viun2g02557 996 PANTHER OS04G0193200 PROTEIN 17 174 IPR038945 -
Viun2g02557 996 MobiDBLite consensus disorder prediction 564 629 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 290 313 - -
Viun2g02557 996 MobiDBLite consensus disorder prediction 765 789 - -
Viun2g02557 996 Gene3D - 104 161 - -
Viun2g02557 996 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 95 IPR001739 GO:0003677
Viun2g02557 996 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02557 Viun-Chr2 31683556 31692445 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02557 - - vra:106777576 1740.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02557 2 31683556 31692445 Viun3g00615 3 3777610 3784870 PCT