Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02524 ATGGGTGCAGAAGCAAACGGCGGCGAGAAGCAACTGAAATTTCTGATCTACGGTCGAACCGGTTGGATTGGTGGTTTGCTGGGTAAGCTGTGCGAAGAGCGAGGCATCGAATACGAGTACGGAAGCGGGAGACTGGAGAACCGGTTGTCATTGGAGGCGGACATAACGGCGGTGAAGCCCAGCCACGTGTTCAACGCCGCCGGAGTGACCGGCAGGCCGAATGTGGACTGGTGCGAATCTCACAAGCTTGAAACCATCCGCACCAACGTCGTCGGCACTCTCACCCTGGCCGACGTCTGCCGTCAAAACAACCTCATTCTCATTAACTACGCCACCGGCTGCATCTTCGAGTACGACTCCTCCCACACCGTCCGATCAGGCATTGCCTTCAAGGAACACGATACTCCCAACTTCACCGGATCCTTCTACTCCAAGACAAAGGCCATGGTGGAGGATCTGCTTCGGAACTACGACAACGTCTGCACCTTGCGTGTGAGGATGCCCATTTCCTCGGATTTGTCGAACCCTCGCAATTTCATCACCAAGATCACTCGATACCACAAGGTTGTCGACATTCCCAACTCCATGACCGTACTCGACGAGCTCATCCCGATCTCGGTGGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAACTTCACCAACCCTGGAGTGGTTAGCCACAACGAGATTCTGGAGATGTACAGAGAATACGTGGATCCCAGTTTCAGTTGGAAGAACTTCAGTTTGGAGGAGCAGGCTAAGGTGATTGTTGCTCCCAGAAGCAACAACGAGCTTGATGCCTCTAAGTTGAAGAAGGAGTTTCCTCATCTTCTCTCCATCAAGGACTCCCTCCTTAAATACGTCTTTCACCCCAATTCCAAGAACCCTAAACTCCTCGTTTAA 906 0.5265 MGAEANGGEKQLKFLIYGRTGWIGGLLGKLCEERGIEYEYGSGRLENRLSLEADITAVKPSHVFNAAGVTGRPNVDWCESHKLETIRTNVVGTLTLADVCRQNNLILINYATGCIFEYDSSHTVRSGIAFKEHDTPNFTGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKITRYHKVVDIPNSMTVLDELIPISVEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPSFSWKNFSLEEQAKVIVAPRSNNELDASKLKKEFPHLLSIKDSLLKYVFHPNSKNPKLLV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02524 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 289 IPR036291 -
Viun2g02524 301 CDD dTDP_HR_like_SDR_e 13 285 - -
Viun2g02524 301 Gene3D - 4 298 - -
Viun2g02524 301 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 11 297 IPR005913 -
Viun2g02524 301 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 3 299 - -
Viun2g02524 301 Pfam RmlD substrate binding domain 13 185 IPR029903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02524 Viun-Chr2 31499385 31500853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02524 K12451 - gmx:100787499 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02524 2 31499385 31500853 Viun2g02524 2 31499385 31500853 ECH
Viun3g04256 3 50267382 50268746 Viun2g02524 2 31499385 31500853 PCT