Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02016 ATGCCTCTCTCGTACTGCGTGAAGGAGAGTAAACCCTGCGTGGGTTGGGCTCAGCGTTACTTCGATGATTGTCTCTGCGATCTTAAAGATGAAATCTCCTTTGCCCTCGGCTTCGTTAGTCTCATATGCTGGGGAGTAGCAGAAATCCCTCAGATTATCACCAACTTTCGAGCTAAGTCTAGCCATGGTGTCTCCCTCGCCTTTCTCCTCACTTGGGTCGCTGGCGACATATTCAATCTCGTTGGTTGTGTTCTTGAGCCTGCCACGTTGCCTACTCAGTTCTACACAGCTCTGCTTTACACAATCACTACGATCGTGCTAGTACTTCAAAGTCTCTATTATGATTATATCTATAAATGGAACAAGCGTCGTCGAAATATCGACATCGACGAGGCCCAGGAAGAAGAGAAAAAACCTTTGAGGCCCAAACCAGCGCCACAGTCTGGGATTGCAATACCAAATGACGAACCCAAAGCAACGCCTAAACGGGAATACTACTACAGGTCAGCGAGATCTCTGGCTGGTAATGATACTCCACCATTTGGTACCTACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCCATGGAAATGAACAATGATTCATCTTCTGATGATGAGGCACCTCCACTTTCCACCAAGCCAGTAACACAGCCTAGACCCATCCCTCGATCTGTCCCTGCAAGCTATGGAACATTTCTAGCAGCATCTATGAACTTGCCCCGCCAGGGTAATGCTTTGAAGGAGGGATACAAAAGATTCAATGGAAGAAAGCTACTCTTGCAGGAGCAAAACATGCACAGTGCGTTGGGTCAATGGTTAGGATGGTTTATGGCTGTGATCTATATGGGTGGCAGGCTCCCTCAAATATGGTTGAATATTAAACGAGGGAGTGTGGAGGGCTTAAATCCTCTGATGTTTCTCTTTGCATTGATCGCCAATGCCACTTACGTTGGAAGTATTCTTGTAAGAACTACAGAATGGGAAAGCATCAGAGCCAATATGCCATGGCTTTTGGATGCCATAGGTTGCGTGGCATTGGACCTATTCATAATTTTGCAGTACGCCAACTATAGATACATTCGGAAGAAAGCAAGAAGTGGTGATGATGCTGATTACGGGAACTACAAGGAAGCCACCAAAAGTTTCGTGTCTTGA 1155 0.4623 MPLSYCVKESKPCVGWAQRYFDDCLCDLKDEISFALGFVSLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDIFNLVGCVLEPATLPTQFYTALLYTITTIVLVLQSLYYDYIYKWNKRRRNIDIDEAQEEEKKPLRPKPAPQSGIAIPNDEPKATPKREYYYRSARSLAGNDTPPFGTYLRAAKSVPSAMEMNNDSSSDDEAPPLSTKPVTQPRPIPRSVPASYGTFLAASMNLPRQGNALKEGYKRFNGRKLLLQEQNMHSALGQWLGWFMAVIYMGGRLPQIWLNIKRGSVEGLNPLMFLFALIANATYVGSILVRTTEWESIRANMPWLLDAIGCVALDLFIILQYANYRYIRKKARSGDDADYGNYKEATKSFVS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02016 384 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 363 - -
Viun2g02016 384 MobiDBLite consensus disorder prediction 194 210 - -
Viun2g02016 384 FunFam Vacuolar membrane PQ loop repeat protein 269 367 - -
Viun2g02016 384 Gene3D - 270 372 - -
Viun2g02016 384 Gene3D - 33 129 - -
Viun2g02016 384 MobiDBLite consensus disorder prediction 193 223 - -
Viun2g02016 384 SMART ctns 46 77 IPR006603 -
Viun2g02016 384 SMART ctns 283 314 IPR006603 -
Viun2g02016 384 MobiDBLite consensus disorder prediction 132 161 - -
Viun2g02016 384 Pfam PQ loop repeat 269 327 IPR006603 -
Viun2g02016 384 Pfam PQ loop repeat 32 88 IPR006603 -
Viun2g02016 384 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02016 Viun-Chr2 28579662 28583073 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02016 K23678 - gmx:100815310 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02016 2 28579662 28583073 Viun2g02016 2 28579662 28583073 ECH
Viun2g02016 2 28579662 28583073 Viun3g03717 3 44149673 44153891 PCT