Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01227 ATGGCTGGTTCATTCAAAAAGTGTATGATGCTCTGTTGCACGGGCAAGACTGTCTCGAAGGAAGAGATGGCAGGAGAATCATTCGGCGAAGCAATCGCAAGACTGACCAAGCTTCTCAGTGAAAAGGCTGAACTCGGCGACGTCGCCACCTTAAAGATCTCGCAGCTGACGGCGGAGCTTGAGGCTGCCGGTGCGAAGCGGTGTGTCCCGGAGGAGAGGATCAAAACGGGCTTCATCACCTTTAGGAATGAGAAATTTTTGAGAAATCCTAGTCTCTATGCCGACCTTGCCAAAGGCCAAAGCCCAAAGTTTATGGTATTTGCATGCTCGGACTCGAGAGTTTGTCCATCCCATATTCTGGATTTCCAACCTGGCGAAGCCTTTATGGTCCGAAACATTGCCAACATGGTTCCACCGTATGACAAGACGAAGTATTCAGGAGCTGGGGCAGCCATTGAATATGCAGTCACGCATTTAAAGGTGGAGAATATTGTTGTTATTGGACATAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGATGGGTCCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATATGTACACCAGCAAGGTCCAAGACTAAAACAAGTGAATTAAGCTTCGAAGAGCAGTGCACTAACTGTGAGAAGGAAGCTGTGAATGTGTCACTTGGGAATCTGTTAAGTTATCCTTTTGTTAGAGCTGGTGTGGTGAACAAAAGTCTAGTTTTGAAAGGAGCACATTATGATTTTGTTAAGGGCACTTTTGAGCTATGGGATTTGAACTACAAGCTTATGCCCTCTATATCTATTTAA 831 0.4573 MAGSFKKCMMLCCTGKTVSKEEMAGESFGEAIARLTKLLSEKAELGDVATLKISQLTAELEAAGAKRCVPEERIKTGFITFRNEKFLRNPSLYADLAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDKTKYSGAGAAIEYAVTHLKVENIVVIGHSCCGGIKGLMSIPDDGSTASEFIEQWVQICTPARSKTKTSELSFEEQCTNCEKEAVNVSLGNLLSYPFVRAGVVNKSLVLKGAHYDFVKGTFELWDLNYKLMPSISI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01227 276 SUPERFAMILY beta-carbonic anhydrase, cab 72 273 IPR036874 GO:0004089|GO:0008270
Viun2g01227 276 SMART Pro_CA_2 97 265 IPR001765 GO:0004089|GO:0008270
Viun2g01227 276 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Viun2g01227 276 PANTHER CARBONIC ANHYDRASE 65 268 IPR001765 GO:0004089|GO:0008270
Viun2g01227 276 CDD beta_CA_cladeB 77 264 IPR045066 GO:0004089|GO:0008270
Viun2g01227 276 FunFam Carbonic anhydrase 59 276 - -
Viun2g01227 276 Pfam Carbonic anhydrase 105 260 IPR001765 GO:0004089|GO:0008270
Viun2g01227 276 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Viun2g01227 276 Gene3D Carbonic anhydrase 66 276 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01227 Viun-Chr2 22955384 22964401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01227 K01673 - gmx:100803945 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01227 2 22955384 22964401 Viun2g01227 2 22955384 22964401 ECH
Viun2g01227 2 22955384 22964401 Viun3g03250 3 39343378 39348220 PCT