Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03486 ATGATATCTTCCTCAGAATTAGGGAATGCATGTTTGATGGGCATGGAGAGTGTGTTTCCGAATCCGATAGAGTATCTGGGAAAAGGGATTGATTTCACAAGTGATTTCCGATTGAAGTTTGCCAAGGGAAAAGGGAGTGCAAGATTGGTGGTTGTTGATGAAGACAACAAGAGGGACATTACTGTTCCTGGTACTGCTGCTACCATTCCCAATGTTTCCCAGGATATTCGCTGTGACAAGGGGGATCGTCTTCGTTTCAAATCTGATGTTCTTCAATTCAATCAGATGTCTGAGCTGCTAAATCAAAAATCGGCAATACAGGGAAAAATTCCTTCTGGCTATTTCAATGCTCTTTTTGATCTGAGTGGTGATTGGTATCATGATGCTCATAACATCAAGTATCTTGCTTTTGATGGTTATTTCATTTCCCTGTTCTATCTGCACCTCACTGTTTCACACCTCATACTGCAAGAGGAAGTGAAAAAGTCTGTTCCAGCTCAGTGGGACCCAGCTTCATTAACCAGGTTCATTCAAACATATGGAACACACATAATAACAGGTATGGCTGTTGGAGGTCAAGATGTAATATGTGTCAAACAAAAGCATTCTTCAAAGGTTTCACCTGGTGATCTAAGAAGACATTTAGAGAATCTAGGAGATTTTTTGTTTCAAGATTTAAGAAGCCCTTCTCAACAACAGACAAACACATCCGCAGAAGCCAAACAAAAAGTTCCTGAGGTCTTCAATCAAGTGATGCAATCAAACACAACGCTGTTCACCAGCATTTCAGAAACTTCAAGCAAGGATGGCCTCACTATCATCTGTTCAAAAAGAGGAGGAGATGTGTTCAAGCACGGTCACTCAAATTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCTATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTCACAGGAATTCCAGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTACTTACGCTATAAGCCCCCTCCCGAAGATTTACAATGCTTTTTGGAGTTTCAAATTCCAAGGCAATGGGCACCAATGTTTTATGAGCTACCTCTGAGGCATCAAAGGAAAAAGAGTACTTCCCCTTCCCTGCAATTTGGTTTCATGTCTCCCAAGCTTCATGTCAGTTCTGCACAGGTAGTGAGTGAAGAAAAGCCTGTGGTAGGCCTCCGTCTGTACTTGGAAGGAAGAAAATGTGATAGACTTGCAATACATGTACACCATCTTTCAAGCCTCCCAAAGACAATGATGATCCACTCTTCAGGCGCATCTTTGTGGCGAGGATCTGATGATAATGAATACTGTGACACCTTTCTGGAGCCAATAAGGTGGAAGGGATTTGCAAACGTGTGCACTGCAGTGGTTAAACATGACCCTAACTGGTTGCAAGAATCAGGTGGTGGTGGTGGTGTTTACATTGTAACCGGTGCACAGCTCATTAGCAAAGGGAATTGGCCAAAGAATGTGCTTCACTTGCGCCTCCGATATACCCACATACCCAATTGCAGCATCAGGAAATCAGATTGGGGTGGTGCACCTGAGGCTTCAAGAAAATCATCTTTCCTCACAAATTTAAGCACAACATTTTCATTCACACAGCAAAGTGTCACTACTACTTCTCCTCAGAAGCAGGCTCCAACATCACTTGACTCTGGTGTTTATCCAAATGGTCCACCTGTGCCTGTTCGTTCTGGAAAACTGCTTAAATACGTGGATACAAGCGAGGTTCTGCGGGGGCCACATCATGCTCCAGGACATTGGTTGGTAACAGCTGCTAAGCTTGTCAATGAGGGTGGTAAGATTGGATTGCAGGTCAAGTTTGCACTGTTAGATTACTAG 1860 0.4317 MISSSELGNACLMGMESVFPNPIEYLGKGIDFTSDFRLKFAKGKGSARLVVVDEDNKRDITVPGTAATIPNVSQDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWYHDAHNIKYLAFDGYFISLFYLHLTVSHLILQEEVKKSVPAQWDPASLTRFIQTYGTHIITGMAVGGQDVICVKQKHSSKVSPGDLRRHLENLGDFLFQDLRSPSQQQTNTSAEAKQKVPEVFNQVMQSNTTLFTSISETSSKDGLTIICSKRGGDVFKHGHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPEDLQCFLEFQIPRQWAPMFYELPLRHQRKKSTSPSLQFGFMSPKLHVSSAQVVSEEKPVVGLRLYLEGRKCDRLAIHVHHLSSLPKTMMIHSSGASLWRGSDDNEYCDTFLEPIRWKGFANVCTAVVKHDPNWLQESGGGGGVYIVTGAQLISKGNWPKNVLHLRLRYTHIPNCSIRKSDWGGAPEASRKSSFLTNLSTTFSFTQQSVTTTSPQKQAPTSLDSGVYPNGPPVPVRSGKLLKYVDTSEVLRGPHHAPGHWLVTAAKLVNEGGKIGLQVKFALLDY 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03486 619 MobiDBLite consensus disorder prediction 540 565 - -
Viun1g03486 619 Pfam MAC/Perforin domain 115 328 IPR020864 -
Viun1g03486 619 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 7 342 IPR020864 -
Viun1g03486 619 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 18 619 IPR044663 GO:0006952|GO:0012501|GO:2000031
Viun1g03486 619 SMART MACPF_8 132 330 IPR020864 -
Viun1g03486 619 MobiDBLite consensus disorder prediction 540 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03486 Viun-Chr1 41620378 41625159 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03486 - - vun:114162687 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03486 1 41620378 41625159 Viun3g02217 3 18848260 18853332 PCT