Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03462 ATGTCTTCAGACATGCCCTTCCCTTCCAAGCGACAAAAAACATCGCCGGAGAAAACCTCCGACTTCTTCGAATCTTTGCCGGACGATCTTCTCCTCTCTATCCTCTGCAAGCTCAGTGCCACAGCATCGTCACCCTCCGATTTTGTCAATGTCTTAGTAACGTGCAAGAGACTAAACTCTCTGGGCCTTCACTCTCTGGTGTTATCAAAAGCATCCCACAAAACATTCTTAGTCAAACCCCAAAATTGGTGTGATTCTGTTCACCGTTTTCTCAAGCATTGTGCCGATGCCGGAAACATTGAAGCCTGTTACACTCTCGGCATGATTCGGTTTTATTGTCTGCAAAACAGAGGGAGCGGCGCGTCGCTGATGGCGAAGGCGGCTATGAATTCTCACGCGCCGGCGCTGTATTCTCTTGCCGTGATACAGTTCAACGGAAGCGGCGGCACAAAAAACGACAAGGACCTCCGGGCCGGAGTCGCGCTGTGCGCACGCGCGGCTTTTCTCGGACATATCGACGCGCTGCGTGAGCTTGGTCATTGTCTGCAAGACGGTTACGGCGTCAAGCAGAACGTAGCGGAAGGTCGACGCTTTTTGTTGCAAGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCCGCCGCGAGCAATAAGCGTCCGTGGGTGACGTGGAACCTCCCAGTACCGCACCCGCGACTCCGTTTGGGGACCGGGTCGGGTTGTCCGCTGTTGAGTGATTACGGTTGCAACGTGCCGGCGTCGGAGACTCATCCGGCGAGTAAGTTTTTGTCGGAGTGGTTTGTAATTCGGAGCGGGTCGTTGGGTCCGGGTATGAGACTGTGTTCACATACGGGTTGCGGGCGACCCGAGACTAGGAGGCACGAGTTCCGGAGGTGTTCAGTCTGCGGTGTGGTGAATTATTGCTCGCGCGCGTGTCAGGCGCTTGATTGGAAATTCCGGCATAAGGCGGAATGTGCTCCCGTTGAGAGGTGGCTCAATGACGACGGGGAAGAAGTCGCCGGCGAGGACGGCGTTGGCGGCGACGCCGTAATGATGGCTAATAGTTAG 1065 0.5568 MSSDMPFPSKRQKTSPEKTSDFFESLPDDLLLSILCKLSATASSPSDFVNVLVTCKRLNSLGLHSLVLSKASHKTFLVKPQNWCDSVHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSAASNKRPWVTWNLPVPHPRLRLGTGSGCPLLSDYGCNVPASETHPASKFLSEWFVIRSGSLGPGMRLCSHTGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEEVAGEDGVGGDAVMMANS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03462 354 MobiDBLite consensus disorder prediction 1 21 - -
Viun1g03462 354 Gene3D Tetratricopeptide repeat domain 84 218 IPR011990 GO:0005515
Viun1g03462 354 PANTHER MYND DOMAIN-CONTAINING 9 346 IPR044508 -
Viun1g03462 354 Pfam MYND finger 285 324 IPR002893 -
Viun1g03462 354 SUPERFAMILY F-box domain 10 81 IPR036047 GO:0005515
Viun1g03462 354 FunFam Predicted protein 272 329 - -
Viun1g03462 354 ProSiteProfiles Zinc finger MYND-type profile. 282 324 IPR002893 -
Viun1g03462 354 CDD F-box_SF 24 61 - -
Viun1g03462 354 SUPERFAMILY HIT/MYND zinc finger-like 278 329 - -
Viun1g03462 354 SUPERFAMILY HCP-like 89 203 - -
Viun1g03462 354 Gene3D - 275 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03462 Viun-Chr1 41508623 41510277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03462 - - var:108319040 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03462 1 41508623 41510277 Viun3g02255 3 19442997 19444806 PCT