Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03382 ATGAAGTGTCTCTCCTCATCCTCCGTTTCTCTTTTTATTTTCCTTTGTCTATGTTTTGAGAGTGTGTGGACTAAAAATGTATCGGAGAGTGATCGACAGGAAGCTAGCATTCCACCAAGAGGTTGGAACTCCTATGATTCCTTTTGCTGGACAATATCTGAAGAAGAATTCTTGCAGAGTGCTGAAGTAGTTTCTCAGCGTCTCCACGATCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTTGAGGGTGCTTATCATGATTCTCTTGGATTTGATGTGATTGATAAATGGGGGAGGATGCTACCTGATCCAGGAAGGTGGCCTTCTTCTGAAAATGGGAAAGGATTTGCTGAAGTAGCTAATCGAGTTCATGGCATGGGTTTGAAATTTGGAATTCATGTCATGAGAGGGATAAGTACACAAGCTGTAAACGCAAACACCCCTATCCTTGATACAAAAACGGGAGGTGCTTATCAAGAATCTGGTCGGGTGTGGTATGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTGAATACAAAATTGGGAGCGGGAAAAGCTTTTCTGAGATCCCTTTATGAGCAGTATGCTTCATGGGATGTTGATTTTGTGAAACATGACTGTGTATTCGGGGATGACTTTGATTTAAATGAAATAAGCTATGTTTCTGAGGTTCTCAAGGAGTTTGATCGCCCCATTGTATATTCTTTGTCTCCTGGAACTAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTGGTTAATATGTATCGTGTAACAGGAGATGACTGGGATACATGGGGGGATGTCAAATCACATTTTGATATTGCCAGGGATTTCTCAAATGCCAATTTGATAGGAGCAAAAGGTTTAACGGGGAAATCTTGGCCTGATTTGGACATGCTACCCTTTGGATGGCTAACTGATCCTGGTTCAAATGAAGGTCCACATAGGTTTAGTCACCTCAATCTGGAAGAAAAGAAGACACAGATGACTCTTTGGTCTATGGCAAAGTCTCCCCTTATGTATGGTGGGGATGTTCGGAAGATTGATCCTAGCACATATGATATTATCACAAATCCCACCCTTCTCGAGATTAATTCTTTTAGCTCAAACAATATGGAGTTTCCTTATATCACAAGTGTGAAGAGTGAAGATCAGGATCTTAGTTTGAGAAGAAGTGGTAAAGAAATAAAAACAACTTTCACCCATTCATTAGGCCTCACAAGGTGCAGCGAGTCAAAGGCAATGGGTTGGGCTAGTGAAAGGCTTAACCTATATCTTGAAAGAATATGTTGGAAAAGGAGTTTGGGAAACAAGCATCTTGCCCCCTTCTGTGTGCACAAAAGAGAACTTTACTTCCCGTTAGATGAAGTGAGTATGTATCATCAAGGGAAACATCATTTAGTTGCAACAAACAGATTAAAATTTTGCTTGGATGCTTCTCCAAAACGAAAGCTCACTTCTAAAGAGTTCAAGAGAGGGACATTTTCTCCCTGCAGGTGGGATTCAAATCAGATGTGGGAATTGAATCCTAATGGGACCCTGGTCAATAGTTATTCTGGCTTGTGTGCAACAGTAGAGTCTAGCGAAGATACTATAAATTCTGGTGGCTTGCGCTCTTGGGTTGCTACAGGAAGAAAAGGAGAAGTCTACATTGCTTTCTTCAATCTAAGTGAACAGAAAACAGTAATGTCTGCTAAGGCATCTGATCTGGCTAAGTTTCTTCCTGCCAGAGACTTCAGTTCTTGTGAGGGCAGTGAAGTGTGGAGTGGAGATGCTGTAGAAATAACAAAAGGGAAGTTATCAACAGCAGTGGAAATGCATGGAAGTGTGCTAATTGTTCTGAATTGCAGCTAA 1908 0.4172 MKCLSSSSVSLFIFLCLCFESVWTKNVSESDRQEASIPPRGWNSYDSFCWTISEEEFLQSAEVVSQRLHDHGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDKWGRMLPDPGRWPSSENGKGFAEVANRVHGMGLKFGIHVMRGISTQAVNANTPILDTKTGGAYQESGRVWYAKDIAIPERACAWMPHGFMSVNTKLGAGKAFLRSLYEQYASWDVDFVKHDCVFGDDFDLNEISYVSEVLKEFDRPIVYSLSPGTSVTPAMAKDVSGLVNMYRVTGDDWDTWGDVKSHFDIARDFSNANLIGAKGLTGKSWPDLDMLPFGWLTDPGSNEGPHRFSHLNLEEKKTQMTLWSMAKSPLMYGGDVRKIDPSTYDIITNPTLLEINSFSSNNMEFPYITSVKSEDQDLSLRRSGKEIKTTFTHSLGLTRCSESKAMGWASERLNLYLERICWKRSLGNKHLAPFCVHKRELYFPLDEVSMYHQGKHHLVATNRLKFCLDASPKRKLTSKEFKRGTFSPCRWDSNQMWELNPNGTLVNSYSGLCATVESSEDTINSGGLRSWVATGRKGEVYIAFFNLSEQKTVMSAKASDLAKFLPARDFSSCEGSEVWSGDAVEITKGKLSTAVEMHGSVLIVLNCS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03382 635 SUPERFAMILY Ricin B-like lectins 492 558 IPR035992 -
Viun1g03382 635 CDD GH27 38 383 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 CDD RICIN 519 548 IPR000772 -
Viun1g03382 635 SUPERFAMILY (Trans)glycosidases 35 383 IPR017853 -
Viun1g03382 635 Pfam Alpha galactosidase A 208 383 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 Pfam Alpha galactosidase A 51 146 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 PRINTS Glycosyl hydrolase family 27 signature 341 362 IPR002241 GO:0004553|GO:0005975
Viun1g03382 635 Pfam Alpha galactosidase C-terminal beta sandwich domain 553 632 IPR041233 -
Viun1g03382 635 Gene3D - 547 634 IPR013780 -
Viun1g03382 635 Gene3D Aldolase class I 16 385 IPR013785 -
Viun1g03382 635 SUPERFAMILY Glycosyl hydrolase domain 551 632 - -
Viun1g03382 635 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 9 634 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03382 Viun-Chr1 41095228 41100213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03382 2 467 Glycoside Hydrolase AT3G26380 66.738 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03382 - - gmx:100777954 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01069 3 6702534 6707469 Viun1g03382 1 41095228 41100213 PCT