Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03080 ATGGTGTTGAAGAAGAGGGTAGATAATGGATTCAATGGCTTTCGTGTTCCTATTATACCTAAAGCTCCTAGATCTGTAAGGAGGAGGGGTCCTTTGAACAAAGCAGCAGAGGATGGTCGAGTTTGTGCTATTGAACTACTGGCATCTTTAGCTGGCCAATTGCTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAATGCATCTGAAGGAAATGTTCAACCGGCCTTTAGCCAAGGTGTGATTGAGCAAGCAAGAGAGAATGAAGTTAAACCATTAAAAAAGGAGGAAATTCACCAGGGAAGTTGTGCTGAGAGCACTATTAAGACTGAGGTAGGGTCACAAAACAGTAGCCAGAAACCTCCTCCATATGCCAAGACTGATTTTTCGCAAGGACATGTTACGGTTAATAATGATTCTGACATTTGGGAGAAAGTTGAAGGTGATGTGAAGTCTGAAATTTTCAAATGGGATAACAAATTTGGGAATTATTCTAATAGATTAGTAAAAACACCCGAAAAGTTTAGGGAGTCTAGTGATGGTAAGATGAAGAATGGATTTAAACAGGAACAAGAAGCTGGCAGTTCATGCTTTAGGGGATCAAATTTGGCTGATAAATGTAGTTTGAAAGACCACTTAGAATTGTATGTATCTCCTACACTAATTAACTCAAAAAGTAATATTAAATCTTCCTTTCATAGGAAATCTTCTCCCAGTGCTTCCTTTTCCAGGCGTGGGAATGTTGTTAAATTAGGTTCTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAGAGTTTGCACAAAGTCAAAGGCTTTTAGGTCTCCGAGACGCATTGCGCACAGAAGAATCAGGAATTTGATGTCTTCTAAATACTGGAAGACTGCTCCAAAGCTGAAAGACTGTGAACTTTCAAGATCTGATTTAGGAGTACCTCATTATCACAAGAGGAAGACTTTCTATGGTTTTGAAAGGTCTCAGCACAACACTATTATTAAGAAGAGGAAAATCGTTGATCGGGTTTCAGGGGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTATCCAATTCACCTCAGAAAGGGACAGATGGAGACAAGCCTAACTCATCTACAAAACTGCATTTAGCTAAGGCTAAGGATTCCCATGTAAAATTTAGCATCAAGTCGATAAGGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCAACTGTCGGTTCGCTAAAGAGGACAATCATGGAGGCGGTGATGGCGATACTTGGAGGGGGCGCGCATGTTGGTGTTCTTCATCATGGGAAAAAAGTCAGAGATGACAGTAGGACACTTGTGCAGACTGGTATATCTTGCAACGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCGTTTCTCTTCAAGCTTCTCCAACTGTTTGTGCTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGCTCACTAGGCCCATAGAAACTCCTGCCTTAGATTCAGGGATTACTGATACCTTGCATGACTCACCCTTGCTGACATATCCGGGCAACCTAATTGAAAGTAACCAAGAGACTACTTCTTCACTCGCCGACACAACAGTTGACAAAATAACATCTGATTGCAGAGCGCTGGTTCCTGTCCCAGCTAGCACAGAAGCATTAGCTGTGGTTCCTGTGAGTCAGAAAACTAAGCGTTCTGAGTTTGTACAGCGTCGAACTAGGAGGCCATTTTCTGTAACTGAGGTAGAAGCACTTGTTCACGCAGTTGAAGAACTTGGAACTGGAAGGTGGCGTGATGTTAAGTTACGAGCTTTTGAGAATGCAGATCATAGAACTTATGTAGACCTAAAGGATAAATGGAAAACATTGGTGCATACTGCAACAATCTCCCCTCAACAGAGGAGAGGAGAGCCTGTACCTCAGGAGCTTTTGGATAGAGTTTTGGCTGCTCATGCTTTCTGGTCTCGGCATCAAGCTAAGCAGCATGGAAAGCATCAAACTGGATCTGGAGCCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCTTGTGTTTGTTGA 2043 0.4234 MVLKKRVDNGFNGFRVPIIPKAPRSVRRRGPLNKAAEDGRVCAIELLASLAGQLLQESESSASSNASEGNVQPAFSQGVIEQARENEVKPLKKEEIHQGSCAESTIKTEVGSQNSSQKPPPYAKTDFSQGHVTVNNDSDIWEKVEGDVKSEIFKWDNKFGNYSNRLVKTPEKFRESSDGKMKNGFKQEQEAGSSCFRGSNLADKCSLKDHLELYVSPTLINSKSNIKSSFHRKSSPSASFSRRGNVVKLGSRDDDENFLRCKRVCTKSKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSRSDLGVPHYHKRKTFYGFERSQHNTIIKKRKIVDRVSGVTSDGGFSSESVSNSPQKGTDGDKPNSSTKLHLAKAKDSHVKFSIKSIRIPELYIEVPETATVGSLKRTIMEAVMAILGGGAHVGVLHHGKKVRDDSRTLVQTGISCNENLDTLSFMLEPVSLQASPTVCAGDPSSQCETSQLTRPIETPALDSGITDTLHDSPLLTYPGNLIESNQETTSSLADTTVDKITSDCRALVPVPASTEALAVVPVSQKTKRSEFVQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSRHQAKQHGKHQTGSGALKITEASAERPCVC 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03080 680 MobiDBLite consensus disorder prediction 344 368 - -
Viun1g03080 680 ProSiteProfiles Myb-like domain profile. 564 619 IPR001005 -
Viun1g03080 680 MobiDBLite consensus disorder prediction 101 129 - -
Viun1g03080 680 SUPERFAMILY Homeodomain-like 570 650 IPR009057 -
Viun1g03080 680 SMART sant 568 621 IPR001005 -
Viun1g03080 680 MobiDBLite consensus disorder prediction 86 100 - -
Viun1g03080 680 Gene3D - 557 661 - -
Viun1g03080 680 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 565 623 IPR017930 -
Viun1g03080 680 CDD SANT_TRF 570 620 - -
Viun1g03080 680 MobiDBLite consensus disorder prediction 86 129 - -
Viun1g03080 680 MobiDBLite consensus disorder prediction 344 374 - -
Viun1g03080 680 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 660 IPR031105 -
Viun1g03080 680 SUPERFAMILY Ubiquitin-like 378 458 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03080 Viun-Chr1 39146462 39151335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03080 - - gmx:100795471 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03563 5 45286312 45292187 Viun1g03080 1 39146462 39151335 ECH
Viun1g03080 1 39146462 39151335 Viun1g03080 1 39146462 39151335 ECH