Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02965 ATGACACCCAACATCACTGTCAATGGCACCACTGAGCAAATCAAACGTAGTAGTGACCGTGCCTTTGTGACTTTCCTTGCTGGGAATGGCGATTACGTGAAAGGTGTTGTGGGTTTGGCCAAAGGGTTGAGAAAGGCCAAAAGCATGTACCCTTTGGTGGTTGCTGTGTTACCTGATGTTCCTGAGGAACATCGTGTGATTTTGAAATCTCAAGGTTGCACTGTCAGGGAGATTGAACCTGTGTACCCACCTGAAAACCAGACACAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGATGGTGACATCCAGGTTTTCGGAAACATTGACCACTTGTTTGATCTTCCTGATAACTATTTCTATGCTGTGATGGATTGCTTCTGCGAGAAGACTTGGAGCCACAGCCCTCAGTACCAGATTGGTTACTGCCAACAGTGCCCTGATAAAGTTCAGTGGTCCTCTCATTTGGGTCCTAAACCTCCTCTATATTTCAACGCTGGCATGTTTGTCTATGAACCTGATCTTGTCACTTACCGTGATCTTCTTCAAACACTTCAAATCACCAAGCCCACATCTTTTGCTGAGCAGGACTTTCTGAATATGTACTTCAAGGACAAGTACAAGCCTATACCAAACTTGTACAACCTTGTGCTGGCTATGTTGTGGCGTCACCCTGAGAATGTTGAACTTGACAAAGTTCAAGTGGTTCATTATTGTGCTGCTGGGTCTAAGCCTTGGAGATTCACTGGGAAGGAGGAGAACATGGAGAGGGAAGATATCAAGATACTTGTGAAGAAGTGGTGGGAGATATATGAAGATGAGACACTAAACTACAATAACGACAACTCTGTGAATGTGGAACGTTTGTCTTCAGCACTGTCGGAGGCTGGTGGCAATATTCCACTCGTGTCAGCACCTTCTGCTGCATAA 981 0.4475 MTPNITVNGTTEQIKRSSDRAFVTFLAGNGDYVKGVVGLAKGLRKAKSMYPLVVAVLPDVPEEHRVILKSQGCTVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFGNIDHLFDLPDNYFYAVMDCFCEKTWSHSPQYQIGYCQQCPDKVQWSSHLGPKPPLYFNAGMFVYEPDLVTYRDLLQTLQITKPTSFAEQDFLNMYFKDKYKPIPNLYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEENMEREDIKILVKKWWEIYEDETLNYNNDNSVNVERLSSALSEAGGNIPLVSAPSAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02965 326 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 294 - -
Viun1g02965 326 FunFam Hexosyltransferase 18 296 - -
Viun1g02965 326 Pfam Glycosyl transferase family 8 24 265 IPR002495 GO:0016757
Viun1g02965 326 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 17 295 IPR029044 -
Viun1g02965 326 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 291 IPR029044 -
Viun1g02965 326 CDD GT8_Glycogenin 20 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02965 Viun-Chr1 38372726 38375473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02965 1 326 Glycosyltransferase AT1G56600 73.810 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02965 K18819 - gmx:100800249 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02965 1 38372726 38375473 Viun1g02965 1 38372726 38375473 ECH
Viun1g02965 1 38372726 38375473 Viun7g01967 7 24752150 24753738 PCT