Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02857 ATGGCCCCTGAACTTGTCCCCACCGTCACAAAATCCACGGCCTCCTTCACCAGCCCCACCACCCTGCCACCACGTGCTTATGTCACATTCCTTGCCGGAAACGGTGACTATGTAAAAGGGGTGGTTGGTCTTGCCAAAGGCTTACGGAAGGTCAAAACCGCCTACCCATTGGTGGTGGCCTGCCTCCCTGACGTGCCGGAAGACCACCGTAAGATCCTTAAATCTCAGGGCTGTATCGTCCGTGAGATTGAACCCGTTTACCCACCAGAAAACCAGACCCAGTTCGCTATGGCTTATTACGTCATCAACTATTCCAAGCTCCGTATATGGGAGTTTGTAGAGTACAGTAAGATGATATACTTGGACGGAGACATTCAAGTATTTGAGAACATAGACCACTTGTTTGACCTACCTGACGGTAACTTTTACGCCGTGATGGACTGTTTCTGTGAGAAGACATGGAGTCACAGTCCTCAGTACAAGGTAGGGTACTGTCAGCAGTGTCCAGAAAAGGTGCAGTGGCCCACCGAATTGGGCCAGCCCCCTGCTCTTTACTTCAACGCCGGCATGTTTGTTTTTGAGCCTAGCATGACCACTTACCATGACCTACTGAAAACGTTGAAAGTCACTACTCCCACATCGTTTGCAGAACAGGACTTCTTGAACATGTACTTCAAGGACATTTATAAGCCAATTCCTCTGACCTACAACCTTGTTCTCGCGATGCTGTGGCGTCACCCAGAAAATGTCAACCTTGAGGAAGTCAAGGTTGTTCACTACTGTGCAGCGGGGTCGAAGCCTTGGAGATATACTGGGAAAGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGCGTAAATGGTGGGATATCTACAACGATGCTTCGCTTGATTACAAGCCATTAGGGGCAAGTGAAGCTTCAGTGGATGGTGTTGACATGGAACCATTGGAACCATTGGGACATCTACCAAAGGTTGTTCAACGTGTTCTTGCTGCACCTTCAGCAGCTTAG 1017 0.4897 MAPELVPTVTKSTASFTSPTTLPPRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVACLPDVPEDHRKILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGNFYAVMDCFCEKTWSHSPQYKVGYCQQCPEKVQWPTELGQPPALYFNAGMFVFEPSMTTYHDLLKTLKVTTPTSFAEQDFLNMYFKDIYKPIPLTYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVRKWWDIYNDASLDYKPLGASEASVDGVDMEPLEPLGHLPKVVQRVLAAPSAA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02857 338 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Viun1g02857 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 300 IPR029044 -
Viun1g02857 338 FunFam Hexosyltransferase 23 301 - -
Viun1g02857 338 CDD GT8_Glycogenin 25 296 - -
Viun1g02857 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 301 IPR029044 -
Viun1g02857 338 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02857 Viun-Chr1 37620346 37622269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02857 1 338 Glycosyltransferase AT1G56600 73.178 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02857 K18819 - gmx:100809287 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02857 1 37620346 37622269 Viun1g02857 1 37620346 37622269 ECH
Viun1g02857 1 37620346 37622269 Viun7g01967 7 24752150 24753738 ECH