Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02563 ATGGCTTGCACCGATAACACAACCGCCGCCATCCACCAACCACCCGCTGCCACCACCATCTCCGATATGCATCCCGACATAATTCAAACCCACATCCTCACGCGCCTCCACGGCCCTGCCCTCGCTTCAATTGCCAGCACGTGTTCCCAACTCCACGCCCTCTCGGAACACGAGCAGCTCTGGGAGAACATCTGCCATGCCACGTGGCCTTCAACCAGGACGCCACGCGTGCGCCACATAATCTCAACGTTCCCAGGCGCCTCTCGTTCTTTTTTCTCCGACTCCTTCCCATCGTTTGCTGCTGCGGACACTTATCGCCACGCGAACATCGAGCGTACGCCGGAGCTTGTCACGGCGGTGGACCTATTCCACGGGCGGCAGCGGGTGCTTTCGCGGGTGGTGGAGACGGAGACGGAGTCAGGGTGGTTCCGGTGCTCGCCGTTCAGAGTTGACGTGCTGGATCCGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCGCGGAGCGAGGAAGCGTGCGAGAGGCTCCGGGAGGAGTTGAGGCTGAGCTGGATAGTGGTGGATCCTGAGGGGAAGCGCGCGGTGAACGTGTCGAGCGGGACGGCGGTGTCCGTGGAGCGGCACTGGCTGAGTGGGGAGGTGCGGGTGCGGTTCGCGACGGTGGTTGGAGGCGGGGAGAGGGGTTCGGCATCGGAGGCGGTGCTGTGTTGCGTGACTGTGACCTGCGGGAGTGAGATGCAGGTGAGGGAAGCGTGTGTGCAGATGGAGGACATGGATGGAACGATCCTTAATGGGAGGGATAGTTTGGGGATTTTGCAAAGGGCGTTGGAGGGTAAAAGGGGAACATTGTTCTTGACCGGAGAAAAGGATAAATTCTTGGAATTTATGAATCGAAAGAGTGAAAGAAAAGAAAGGAAAATCAGAGACGAAAGAAGGTTAGACATGGCTTGCGTGGCTCTCGCGCTTTTGTCCTTTGCGGCTATTTCCACACTGTTTTTCTTCCGAATATAA 1008 0.5833 MACTDNTTAAIHQPPAATTISDMHPDIIQTHILTRLHGPALASIASTCSQLHALSEHEQLWENICHATWPSTRTPRVRHIISTFPGASRSFFSDSFPSFAAADTYRHANIERTPELVTAVDLFHGRQRVLSRVVETETESGWFRCSPFRVDVLDPKEAVATAMEYPRSEEACERLREELRLSWIVVDPEGKRAVNVSSGTAVSVERHWLSGEVRVRFATVVGGGERGSASEAVLCCVTVTCGSEMQVREACVQMEDMDGTILNGRDSLGILQRALEGKRGTLFLTGEKDKFLEFMNRKSERKERKIRDERRLDMACVALALLSFAAISTLFFFRI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02563 335 Coils Coil 292 312 - -
Viun1g02563 335 PANTHER F-BOX PROTEIN-RELATED 15 327 IPR045283 -
Viun1g02563 335 Gene3D - 7 109 - -
Viun1g02563 335 SUPERFAMILY F-box domain 18 86 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02563 Viun-Chr1 35794678 35795968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02563 - - gmx:100801673 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02563 1 35794678 35795968 Viun1g02563 1 35794678 35795968 ECH
Viun7g01823 7 23351932 23353771 Viun1g02563 1 35794678 35795968 PCT