Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02214 ATGGAGGAGGCGCTGGAACTGTCACGCGCGAAGGATACGAAGGAGAGGATGGCGGGCGTGGAGCGCCTCCACCAACTTCTGGAAGCTTCCAGAAAGAGCCTCTCGTCTTCCGAGGTGACTTCGCTCGTCGACACTTGTATGGATCTCTTGAAGGACAATAACTTCCGCGTTTCGCAGGGCGCGCTGCAGGCACTCGCCTCCGCCGCCGTCCTCTCCGGCGACCACTTCAAGCTTCACTTCAACGCACTCCTCCCCGCCGTCGTCGACCGTCTCGGCGACGCCAAACAGCCTGTTCGAGACGCCGCCAGGCGCCTCTTGCTCACTCTCATGGAGGTTTCTTCTCCAACAATAATTGTTGAAAGGGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAGGAGTTTACACGAACTGTCACAGCTGCAATTAATTTATTTGCATCTACAGAGCTCCCACTTCAACGGGCTATCCTTCCCCCTGTTTTGCATTTGCTAAGCGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAAGAAATGTATACTCAAGCTGGGCCTCAATTTCGTGATGAACTTCACCGCCACAATCTTCCTTCATCATTGGTGAAAGATATTAATGCCAGGCTTGAAGGAATTCAGCCAAATGTTCGCTCTTCAGATGGTATTCCAGGTGGATATATTACTGGGGAAATTAAGCATTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCCAGGGAGACCTCTCTTTTCGGAGGAGAAGGTGACATCACTGAGAAACCCATAGACCCTGTGAAGGTATATTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTTCGAGGGCTCTTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGATCTAGCATTGTGAAGCAGGCCTGCCATCTATTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGCATGTGCGGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGTTGCGCAACTGCAAAGTTGCTCGTGTTCTTCCCCGTATAGCTGATTGTGCAAAAAATGATCGAAATGCTGTACTTCGTGCAAGGTGTTGTGAATATGCACTTTTGGTCCTGGAACATTGGCCTGATGCACCAGAAATACATCGATCTGCTGATTTATATGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTTCGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAACGATCTCGTCGCCTATTTGCATCCTTTGACCCTGCCATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATCGGCGACATGCTTCACCTTCCATTCGAGACAGAGGGGCACTGACATCATTGGCTAGTCAGACCTCAGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCGATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCCTCTGGTATACTTCTATCACAAGCTAAGTCACTTGGTAAGGGTACCGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAGCAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGATAAGCATAATTCATCTTTCCGGTCATCGAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCTCCGCAACTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTACTTCTGGCATCAATAAAGGTAGTAACAGAAATGGTGGTCTTGGTTTGTCTGACATAATCACCCAGATTCAAGCTTCAAAGGATTCTGCCAAGTTGTCCTATCATAGCACTGTTGGTATTGAACCTTTATCATCAATATCATCATATTCGAGTAAAAGGGCCTCTGACAGATTACAAGAAAGAAGTTCACTTGATGATAACAGTGATATTAGGGAGACTAGGAGATTTATAAAACCCAACCACGATAAGCAGTATTTGGATGCCCCTTATAGAGATGGGAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAGCTATCTGTTGGAGAGATGCCAAATTATGCGGAAGGACCCTCATCTCTTCACGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGGCCAAAAGGAGTTATTGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAAGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAAGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGATCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTTTGGAAGTTGTGAACAAAACATACAGTATAGATTCTCTTTTACCGGCATTGTTACGCTCACTGGATGAACAGAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATGCCATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTGACCCCTCTGGTTCATGATAAAAATACAAAGCTTAAAGAAGCAGCCACTACATGCATTATAGCAGTGTATTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCTTTAAAACAATATACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAAAGACAACGTTCTAAGTCTTCCTATGATTCATCTGATGTGGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAGGCTCATTACCTTGGAAGGTATTCTGCTGGATCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAGGATTCAACACTAGTGAAAGCTAGTCTTGGTCAAGCATCTTCTGGTGAAACTCAGGAACATCTGTATCAAAATTTTGAAACTGATCCCAATAGTGGCAGTCTTGCTTCAAAAACTAAAGATCTTGCTTATGCAATCAATCCAATGGGTCAAAACTTTGCCTCTCAAACTAACCAACATAGACATGTGGACAGTAGCATAAACTTGGAAGGTCTTTCAACTCCTCGTCTAGATGTAAATGGTTTGATGTCATCTGAGCATTTAAATGTTGCTGAGGGCTATGTAAATGACACGGAACATTCTTCTGAATTGGCATTCAATCATAACACAGCCGAAGATGTAAAGATTAACTCCATAACAGAAACAGGACCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGGGGTGAGGGAAGCCCTATTTCAAGTAAACGAACTGCACTTCAACAATTAGTTGATGCTTCTATATCAAATGATCATTCTATTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTACTGGATGATTCAGATTCCTCGGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGCGACATGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCACGTTACAAAAGATATCATTCCTAAGGTCTCCAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACACTTGTCATTTGCATCAATTGCTTAACAAAGCTTGTAGGGCGGCTTTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCCGCTCTTTTTGAAGCCTTTGGTAACCAGAGTGCAGATGTTCGCAAGACCGTTGTTTTCTGCCTTGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCGTATTTGCAAGGGCTTAACAGCACGCAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCTAGGACAGGCAAAACAATTGATGCCGTTCAAGATTAG 4338 0.4297 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLSDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPNVRSSDGIPGGYITGEIKHLSVNPKKSSPKAKSSSRETSLFGGEGDITEKPIDPVKVYSDKELIREIEKIASTLVPEKDWSIRIAAMQRVEGLVLGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFASFDPAIQRLINEEDGGIHRRHASPSIRDRGALTSLASQTSAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSFRSSSLDLGVDPPSSRDPPFPAAVSATNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYHSTVGIEPLSSISSYSSKRASDRLQERSSLDDNSDIRETRRFIKPNHDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSVGEMPNYAEGPSSLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGVIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVNKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAATTCIIAVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDSSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLVKASLGQASSGETQEHLYQNFETDPNSGSLASKTKDLAYAINPMGQNFASQTNQHRHVDSSINLEGLSTPRLDVNGLMSSEHLNVAEGYVNDTEHSSELAFNHNTAEDVKINSITETGPSIPQILHMVCSGGEGSPISSKRTALQQLVDASISNDHSIWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGDMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKTIDAVQD 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02214 1445 Gene3D - 796 1020 IPR011989 -
Viun1g02214 1445 FunFam Protein peg1 266 513 - -
Viun1g02214 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 633 660 - -
Viun1g02214 1445 Pfam CLASP N terminal 802 996 IPR024395 -
Viun1g02214 1445 Pfam CLASP N terminal 284 500 IPR024395 -
Viun1g02214 1445 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Viun1g02214 1445 Gene3D - 1228 1437 IPR011989 -
Viun1g02214 1445 Gene3D - 1 221 IPR011989 -
Viun1g02214 1445 SMART TOG_3 1198 1437 IPR034085 -
Viun1g02214 1445 SMART TOG_3 3 224 IPR034085 -
Viun1g02214 1445 SMART TOG_3 786 1029 IPR034085 -
Viun1g02214 1445 SMART TOG_3 270 514 IPR034085 -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 701 719 - -
Viun1g02214 1445 PANTHER CLASP 32 1431 - -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 695 719 - -
Viun1g02214 1445 SUPERFAMILY ARM repeat 7 402 IPR016024 -
Viun1g02214 1445 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 243 266 - -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 246 261 - -
Viun1g02214 1445 Gene3D - 267 506 IPR011989 -
Viun1g02214 1445 MobiDBLite consensus disorder prediction 609 660 - -
Viun1g02214 1445 SUPERFAMILY ARM repeat 290 1435 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02214 Viun-Chr1 33201118 33212787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02214 K16578 - gmx:100820523 2622.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02214 1 33201118 33212787 Viun1g02214 1 33201118 33212787 ECH
Viun1g02214 1 33201118 33212787 Viun7g01181 7 13389480 13409696 PCT