Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01970 ATGTCAGTGGCACCAGTTGAGGGTATTCCCGCATTAAGCAGTGATCTCTTCTACGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACGTGTGCAACGTTGTGTTCCATCTCTAAAGAAGAGAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTGATATCTTCTATTGGTGGATTCCGAAAATTTTATGCAGACTGTTTCCCGATTGTTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCACGAGTACCCGGACAATTGGACCGAAGCTGAGTATTACGGAGACATGAATGAATCAGAAAACATCTGTCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGTAAACCGGTCTGTTCCAAAGTTCTCTGGGGAATCCCAAATGCAAACAGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACTTATGCAGATAGAGATGATAACAATGATGGATCTGTTCACCTTTCTGTATCTGATGGTCTGCCACATATTTCATCCATGGAGAGGGAAAGGAAAGATGGGAAACTGTGGCGGGAACTCTGCGAAGGACTCCAGCTTAGTTGGATTATAGTAAACAAGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGACAACGACACTGGCCAACAGATAGGGATTTTGTTATCCGCTTTGGATCAGTTCTGCCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATCCTCATTATGAAGTTTAGAGTGGTTCACACCGAAGAAGAAGGGGTCCAAACAACCCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAATAGTTTGCATATCCTTAAGGATGCACTTAGCAGCCGAAGGAGCAAAAACTATGGTGAAGTACTTGAGTCTTGCCACATGTATTCAAAAGTACAGAATGAATTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGTATTCTGAGTGGCATTGCAGCGTTTATGACGTTCTGGTACTGCGTTTTGTAA 1122 0.4216 MSVAPVEGIPALSSDLFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPIVVNKEVVEYQPNNYHEYPDNWTEAEYYGDMNESENICPSDFVSIIDIRFKGKPVCSKVLWGIPNANSYDGWFYNCPFRIDFLTYADRDDNNDGSVHLSVSDGLPHISSMERERKDGKLWRELCEGLQLSWIIVNKKMKQAANLASWSPLGGQRHWPTDRDFVIRFGSVLPAKDILPCQVVECILIMKFRVVHTEEEGVQTTLKLTELSMQLEDMEGAHVNGRNSLHILKDALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01970 373 PANTHER F-BOX PROTEIN-RELATED 7 370 IPR045283 -
Viun1g01970 373 Gene3D - 5 106 - -
Viun1g01970 373 SUPERFAMILY F-box domain 7 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01970 Viun-Chr1 31019131 31025655 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01970 - - gmx:100500689 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01970 1 31019131 31025655 Viun1g01970 1 31019131 31025655 ECH
Viun1g01970 1 31019131 31025655 Viun7g02080 7 25602194 25605021 PCT