Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02067 ATGGAGTTGCTCTATCTACTATACCTGATTCCAACGTTGTACTCATGTTTCCTCATATGGAAAATGTTGGAGGAGAGACGCGACAGAGAGTGTTACATCTTGAACTACCAATGCTACAAGCCCCCCAACGACCGAATGCTGGACACCGAGTTCTGTGGGAAACTCATCAAACGCTGCGAAAACCTGGGACCCAACGAGTACCGTTTTCTGTTGAAGGCCATCGTCAGCTCCGGCATCGGCGAACAGACTTACGCGCCAAGAAACATCTTCGAGGGCAGAGAGGGAGCGCCCACATTGCGCGACGGCATCGAAGAGATGGAAGAGTTCTTCAGCGACGCCATCGGGAAGCTTCTGGCGAAATCGAAAGTCTCCCCCTCCGAGATCGACGTCCTCGTCGTCAACATCTCCATGCTCGCCGCCGTCCCGTCGCTCTCCTCGCGCATCATCAACCGCTACAAGCTCCGCCACGACGTGAAGGTGTACAACCTCACCGGCATGGGTTGCAGCGCCAGCCTCATCTCCATGGACATTGTGAAGAACATCTTCAAGACGCAGAGGAACAAGCTGGCGCTGCTGATCACCTCGGAGTCCCTCAGCCCCAACTGGTACACCGGCAACGACAGATCCATGATCCTCGCCAACTGCCTGTTCCGCATCGGCGGCTGCGCGGTTCTCCTGACCAACAAACGCTCCTTGAAGGACCGAGCCATGCTGCGGTTGAAGTGCCTGGTGAGGACGCACCACGGTGCCAGAGAAGAGGCTTACGGTTGTTGTATTCAGCGCGAAGACGACCAGGGGAAGCTAGGGTTTCACCTCGGGAAGAATCTCCCCAAAGCTGCCACCCGAGCCTTCGTCGATAATCTTCGAGTCATGGCACCCAAGATATTACCCGTGCGCGAGTTGCTCAGGTTTCTGTTCGTGTCGCTGATAAAAAAAGTCAACAAGAACAACACCCCGAAGTCTGCGAGCACCGGAGCTACAAAATCTCCGTTGAACTTCCGAACAGGGGTGGATCATTTCTGCTTGCATACCGGGGGAAAAGCCGTGATCGACGGCATTGGGCTGAGCTTGGATCTGAGCGAGTACGACCTTGAACCGGCGAGGATGACGCTGCACCGGTTCGGGAACACGTCGGCGAGTAGCCTGTGGTACGTGTTGTCGTACATGGAAGCGAAAAAGAGGTTGAAGAAGGGTGACACGGTGTTCATGATAAGCTTTGGTGCAGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTGATGAAGGACCTGGGTGACCCAAATGTGTGGGACGATTGCATTGATGACTACCCTCCGGAGTCACTGGACAACCCCTTCATGAGGACCTATGGTTGGATCAACGAGGTTGAAGACCCCTACACTTACGAAAATATCCCTGATTTTCTCAAGTGA 1410 0.5426 MELLYLLYLIPTLYSCFLIWKMLEERRDRECYILNYQCYKPPNDRMLDTEFCGKLIKRCENLGPNEYRFLLKAIVSSGIGEQTYAPRNIFEGREGAPTLRDGIEEMEEFFSDAIGKLLAKSKVSPSEIDVLVVNISMLAAVPSLSSRIINRYKLRHDVKVYNLTGMGCSASLISMDIVKNIFKTQRNKLALLITSESLSPNWYTGNDRSMILANCLFRIGGCAVLLTNKRSLKDRAMLRLKCLVRTHHGAREEAYGCCIQREDDQGKLGFHLGKNLPKAATRAFVDNLRVMAPKILPVRELLRFLFVSLIKKVNKNNTPKSASTGATKSPLNFRTGVDHFCLHTGGKAVIDGIGLSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDPNVWDDCIDDYPPESLDNPFMRTYGWINEVEDPYTYENIPDFLK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02067 469 PANTHER 3-KETOACYL-COA SYNTHASE 17 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun11g02067 469 SUPERFAMILY Thiolase-like 243 419 IPR016039 GO:0016746
Viun11g02067 469 CDD CHS_like 19 417 - -
Viun11g02067 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun11g02067 469 Gene3D - 72 419 IPR016039 GO:0016746
Viun11g02067 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Viun11g02067 469 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Viun11g02067 469 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02067 Viun-Chr11 36102249 36104154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02067 19 466 Acyl Lipid Metabolism Gene Families AT2G28630 68.928 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02067 K15397 - gmx:100810048 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03495 5 44879808 44881828 Viun11g02067 11 36102249 36104154 PCT