Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01997 ATGGAAAACACAACTACCCTTTTGCTCTTCTTCTCAGTTCTTCTCTGCCATGGAGCAATGGCCATCCCTGAAGGTGAAGAACACAACTTGTTCTTCATGCATAACCCCAAGACAGTGGTGAAGACCGATGCAGGGGAAATGCATGTGCTGAAAACCCAAAGTGGTTGCAGGAGGTTTTTGGATAGACACATGCACATTGGCTTCATCACTATGCAACCAAAGTCCTTGTTCGTCCCTCACTACCTTGACTCCAATCTCATCATATTCATCCATAAAGGGGAAGCAAATTTGGGATTCATATATGATGATGAAGTGGTGGAAATGAGATTGAAGGAAGGGGATGTGTATGTGATTCCATCAGGTTCAGCATTTTATTTTGTGAACAAAGAGGAAGGTGAGAGACTTCACATCATCTATAGCATTGACCCTTCCACAAGCTTGGGATTAGATACCTTCCATTCTTTCTATATTGGTGGAGGAGCCAATTCACACTCACTGCTTTCTGAATTCGCACCAGCTATTCTCGAAACTGCATGTAATGAATCAAGAATGGAGGTTGAGAGTGTCTTTTATAAGGAACTAGATGGGGCAATCATGTACATGGATGATTCTGATGTACCTAGCTTAGGGACTAAATTCCTTCAACTGAAGAAGGAAGAAAAAGAGCAACACCAGAAGAAAATGCTGCATGACCAAGAAGAAGAAGAAGAAAAAGAAGAGGAGCAACAAACAAGTAGTGCATGGGGAAAACTCTTGGACACTGTATTTGGCAAGGTGAATGAGAAGAGAGAGAGCAAAAACAGTGTTGATTGGAGCAAGGCAACAAATCTCTATGACAAAAAAACTGATTTCAGAAACGATTATGGTTGGAGCAAGACACTGGATGCAGTGCAGTATCCTCCACTCACCAATCCTGACATTGGCCTTTTCTATGTCTATCTCAAAGCGGGATCCATGTTGGGACCTCATGTGAATCCAAGGGCAACTGAGTATAGCATAGTGGTGAAGGGGTGTGGTGAGGTTCATATAGTGTATCCAAATGGAAGCAAAGCAATTAGCACAGAAATCAAAGAAGGGGATGTGTTTGTTGTTCCAAAATCCTTCCCTTTGTGTCAAATAGCATCAAATGATGGAGCCTTAGAGTTGTTTGGCTTCTCCACCTCTGCCAGAGAGAAGAAGCCACTGTTTCTGGCTGGTTCTGTATCCATTCTTAGGACCATGCAAGGGCCTCAGCTTGCGGCGGCGCTTGGGGTGAGTGTAGACACTTTGCGGCGTGCCCTTGATCCTCAGGACGACCTTCTCATCTTTCCGTCAACATGGTCTGCAACACCATAA 1335 0.439 MENTTTLLLFFSVLLCHGAMAIPEGEEHNLFFMHNPKTVVKTDAGEMHVLKTQSGCRRFLDRHMHIGFITMQPKSLFVPHYLDSNLIIFIHKGEANLGFIYDDEVVEMRLKEGDVYVIPSGSAFYFVNKEEGERLHIIYSIDPSTSLGLDTFHSFYIGGGANSHSLLSEFAPAILETACNESRMEVESVFYKELDGAIMYMDDSDVPSLGTKFLQLKKEEKEQHQKKMLHDQEEEEEKEEEQQTSSAWGKLLDTVFGKVNEKRESKNSVDWSKATNLYDKKTDFRNDYGWSKTLDAVQYPPLTNPDIGLFYVYLKAGSMLGPHVNPRATEYSIVVKGCGEVHIVYPNGSKAISTEIKEGDVFVVPKSFPLCQIASNDGALELFGFSTSAREKKPLFLAGSVSILRTMQGPQLAAALGVSVDTLRRALDPQDDLLIFPSTWSATP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01997 444 MobiDBLite consensus disorder prediction 223 246 - -
Viun11g01997 444 Pfam Cupin 36 135 IPR006045 -
Viun11g01997 444 Pfam Cupin 276 420 IPR006045 -
Viun11g01997 444 CDD cupin_7S_vicilin-like_N 39 201 - -
Viun11g01997 444 SMART Cupin_1_3 275 424 IPR006045 -
Viun11g01997 444 SMART Cupin_1_3 28 187 IPR006045 -
Viun11g01997 444 CDD cupin_7S_vicilin-like_C 283 432 - -
Viun11g01997 444 SUPERFAMILY RmlC-like cupins 23 427 IPR011051 -
Viun11g01997 444 PANTHER OS03G0336100 PROTEIN-RELATED 5 439 - -
Viun11g01997 444 Gene3D Jelly Rolls 278 443 IPR014710 -
Viun11g01997 444 Coils Coil 214 242 - -
Viun11g01997 444 Gene3D Jelly Rolls 24 227 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01997 Viun-Chr11 35590849 35593512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01997 38 436 Miscellaneous Gene Families AT2G18540 28.325 9.37e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01997 - - vun:114169134 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03439 5 44479411 44481451 Viun11g01997 11 35590849 35593512 PCT