Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01862 ATGTCATTGCCATCATCACCATCCTCCAAACTCTCTCTTCTCTTCTTCTTCTTCCTTTCACTTTCCTCTTCTTTTGCTACTTCTGATCCCTCTCATGACCCTGCCCACCAGCCACAATCACATGCAGAAAAGCTCATAAGAAGCCATGATGACGATGATGGTTTTGTCCCTGGTATGATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGGCCTTCTGTTGAAGACCTTGGTCACCATGCAGGCTATTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTTCTTTTTCTTTGAATCACGGAAAAGTACGGATGATCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTCTACGAAAACGGTCCTTTTCATATCACCAATAACTTGTCTCTTACATGGAATGATTACGGTTGGGATCAGGCATCAAATATTATATTTGTTGACCAACCAACTGGGACAGGTTTCAGTTACTCTTCTGACGACAGTGACATTCGACACGATGAAGCCGGCGTTAGCAATGATTTATACGATTTCTTGCAGGAGTTTTTCAAGACGCATCCTGATTTCGTTAAGAATGACTTCTACATCTTTGGTGAATCATATGGTGGACACTATGTTCCTGCACTTGCATCCCGGGTTAACCAGGGAAATAAACAAAATCAAACACTTCATATAAACCTCAAGGGTTTTGCTATCGGTAACGGGTTAACCGATCCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTTGACAACAGAATAATTACACAGGCTGAGTACGACAACGTCAGCATGTTAATCCCAGACTGTGAACAAGCCACTAAAACTTGCGAAACTCAGGGTGGAAACAATTGCACCGATGCGTTATATAGTTGTTATAAGATTTTCCAGCGTATCTTAAACTTTACCGACAACATTAATTACTACGACATCAGAAAGAAGTGTGAGGGGCCTATGTGCTACAACTTCACAAACGTGGAGAGATTGCTAAACATGCAGAAAGTGAAGAGTGCTTTAGGTGTGAGCGATGACTTGGGGTATGCCTTATGCAGTTTAGATGTTCGATTTGCGATGATGGAAGACTGGATGAAAAACCTGGAAGTGGGGATTCCTGATCTTCTTGAAGAAGGAATGAAGGTGCTGGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTAGAAGCCATGCAGTGGTCAGGCCAAAAAGCCTTTCAAATATCTCCAACAGGGAAATTTGTGGTTGATGGTGCAGAAGCAGGTTCTCTTAATAGCTATGGACCTCTCACTTTTCTCAAGGTGCATGGCGCAGGGCACATGGTTCCAATGGATCAACCAAAAGCTGCACTTCAGATGATGACAAGCTGGATGGGAGGAAAACTGAATGCCTCCTCTCTTCAAAGTTTTTCTCACCGGCTAAAACCAAGACCGTTGATTGTGTTCTTCATTCTCTTTCTTTATCATATAATCACCGATCAAAGCCTCAGATCTTGA 1545 0.4278 MSLPSSPSSKLSLLFFFFLSLSSSFATSDPSHDPAHQPQSHAEKLIRSHDDDDGFVPGMIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSKAARMFFFFFESRKSTDDPVVIWLTGGPGCGSELALFYENGPFHITNNLSLTWNDYGWDQASNIIFVDQPTGTGFSYSSDDSDIRHDEAGVSNDLYDFLQEFFKTHPDFVKNDFYIFGESYGGHYVPALASRVNQGNKQNQTLHINLKGFAIGNGLTDPAIQYQAYPDFAFDNRIITQAEYDNVSMLIPDCEQATKTCETQGGNNCTDALYSCYKIFQRILNFTDNINYYDIRKKCEGPMCYNFTNVERLLNMQKVKSALGVSDDLGYALCSLDVRFAMMEDWMKNLEVGIPDLLEEGMKVLVYAGEEDLICNWLGNSRWVEAMQWSGQKAFQISPTGKFVVDGAEAGSLNSYGPLTFLKVHGAGHMVPMDQPKAALQMMTSWMGGKLNASSLQSFSHRLKPRPLIVFFILFLYHIITDQSLRS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01862 514 ProSitePatterns Serine carboxypeptidases, histidine active site. 446 463 IPR033124 GO:0004185
Viun11g01862 514 FunFam Carboxypeptidase 67 486 - -
Viun11g01862 514 SUPERFAMILY alpha/beta-Hydrolases 78 477 IPR029058 -
Viun11g01862 514 Gene3D alpha/beta hydrolase 62 485 IPR029058 -
Viun11g01862 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 156 IPR001563 GO:0004185|GO:0006508
Viun11g01862 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 192 217 IPR001563 GO:0004185|GO:0006508
Viun11g01862 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 167 IPR001563 GO:0004185|GO:0006508
Viun11g01862 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Viun11g01862 514 ProSitePatterns Serine carboxypeptidases, serine active site. 206 213 IPR018202 GO:0004185
Viun11g01862 514 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 463 IPR001563 GO:0004185|GO:0006508
Viun11g01862 514 Pfam Serine carboxypeptidase 77 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01862 Viun-Chr11 34555409 34557783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01862 K16298 - gmx:100798795 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01862 11 34555409 34557783 Viun5g03342 5 43787925 43791331 PCT