Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01804 ATGGCGCGAGTGGATCTGGACGGTAACCCCATCAAGCCTATCACGATCTGCATGATCGGTGCCGGTGGGTTCATCGGCTCGCACCTCTGCGAGAAACTCATGCACGAAACCCCTCACACGGTTTTCGCCTTGGACGTTTACAATGACAAGATCAAGCACCTTCTCGAACCCGATTCTCTGCCTTGGGCCGGTCGCATCACCTTCCACCGCCTCAACATCAAACACGATTCTCGCCTCGAAGGTCTCATCAAGATGGCAGATCTCACCATTAACCTCGCTGCGATTTGCACCCCCGCGGATTACAACACGCGCCCGCTCGACACCATATACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCGGAGAATAACAAGCGCCTTATCCACTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCCAAGGATAGTCCTCTTCGTAAGGATCCGGCGTACTATGTTCTTAAAGAAGATGAATCTCCTTGTATTTTTGGTTCTATTGAAAAGCAGAGGTGGTCTTACGCCTGTGCTAAACAGTTGATTGAGAGGCTGATTTATGGTGAGGGTGCTGAAAATGGCTTGGAATTCACCATTGTTAGGCCTTTTAATTGGATTGGACCTAGAATGGATTTCATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCTTGCTTCAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTAGACGGTGGACAGTCTCAAAGAACCTTTGTCTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGAGCTAATGGCCATATATTTAATGTGGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTGAGCGGAGAAAAAACTCCTGCAACACCAACCATTGATGTGAGCTCCAAAGAGTTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTTGGTTGGAATCCTAAGACTTCGCTTTTCGACCTGCTGGAATCCACTCTGACCTATCAGCACAAGACATATGCTGAAGCCATCAAGAAAGTAATTGCAAAACCCGTTGCAAGTTAA 1158 0.4706 MARVDLDGNPIKPITICMIGAGGFIGSHLCEKLMHETPHTVFALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYGEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEKTPATPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLFDLLESTLTYQHKTYAEAIKKVIAKPVAS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01804 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Viun11g01804 385 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 14 377 - -
Viun11g01804 385 Gene3D - 14 376 - -
Viun11g01804 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 369 IPR036291 -
Viun11g01804 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
Viun11g01804 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 15 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01804 Viun-Chr11 34083361 34086180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01804 K12449 - gmx:102667779 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03295 5 43464586 43467583 Viun11g01804 11 34083361 34086180 PCT