Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01680 ATGGGTGTGTTCAGTGAAGACCCCAATCCAATTGTGATCCGTGAAGTATGGGCATCGAATATAGAATCTGAATTCGAACTCATCCGGGAGCTGATCGATCGCTACCCTTTCATCTCCATGGATACTGAGTTTCCTGGAGTGATTTTCCGGCCGCATGTGGACCCTACCAAACCCTACAACCACCGCACGCGCCGCCCTGCTGACCACTACCGCCTCCTCAAGTCCAACGTTGATTCGCTCAACCTGATCCAGGTCGGTCTCACGCTCTCTGACTCTGCTGGAAACCTTCCCGGCGACGACAGGAATCGCTTCATCTGGGAGTTTAACTTCTGTGACTTTGATGTGGCGCGTGATGCCTACGCGCCGGACTCTATCGCGCTCCTCCGCCGCCAGGGGATTGACTTCGAGCGCAACGCCACCAACGGTGTAGACTCCACGCGCTTTGCAGAGCTGATGATGTCTTCAGGACTCGTGTGCAACGACGCGGTGAGCTGGGTCACCTTTCACAGTGCTTACGATTTCGGGTATTTGGTTAAGATCCTTACCCGACAGGATTTACCGACCCGGTTGGAGGAATTTTTAAATGTTGTGAAAGTGTTCTTTGGAGATAATGTTTATGATGTGAAGCACATGATGAGGTTCTGTGATACACTCTACGGTGGTTTGGATCGGGTTGCACGGACGCTTAACGTGGACCGCGCCGTAGGGAAGTGCCACCAGGCTGGGTCAGACAGCTTACTGACCTGGCACGCGTTCCAGAAGATTGTGGATCTTTATTTTGTCAAGGATGAACACCAAAAACATGCTGGAACAGAAGCCTTGTGA 825 0.5224 MGVFSEDPNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPHVDPTKPYNHRTRRPADHYRLLKSNVDSLNLIQVGLTLSDSAGNLPGDDRNRFIWEFNFCDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGTEAL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01680 274 SUPERFAMILY Ribonuclease H-like 6 260 IPR012337 -
Viun11g01680 274 Pfam CAF1 family ribonuclease 16 144 IPR006941 -
Viun11g01680 274 Gene3D - 2 272 IPR036397 GO:0003676
Viun11g01680 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 270 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01680 Viun-Chr11 33052575 33055097 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01680 K12581 - gmx:100811298 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03183 5 42721186 42722803 Viun11g01680 11 33052575 33055097 PCT