Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01627 ATGGCGGGAACCCTAAGCTCCAACTCATTGGTGGGTCAGAAGCAGAGGTTCCGCATTCAGTCGCCCATCAACAACTTCTTCTTGGGCTCCAACAACGACAAGCTCGAGCGCGACGAGGCCCGCGCCGCCCGCGCAGCCGCAATCCGCCGCAAGAGCCTTGGCTTCAGCCAACCTTTTCTGGCCAACTCGGATCCCTGCCTCAACAAACAGCAAATCCTCGATTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAATACGTGGGAGTTGAACCTGATTGATCACCTTACTGATATCATCAAGGCCGAACAAGAAGATGACTCGGAGACTAATTTTCAAAAAGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTACGAGTAGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCTGAGCAAGACACTAGCCTGGATGGTGTTAATATTGAAAGTGGAGGAGAAGAAAGCAGGAAAGAAACAAACAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTCGAGGCACTTAATGTAAAGAAGTTTGATGCTGCATTTGTTGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCTAAGGGTCTTTTAATGAATAATCTTGGAGTATACGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCTGCGAAGTGTATGGAAAAACAAAATCAATCTGATATTTCAGATACTATTGATCTTTCTTTTGTCAAAGATTGTATTGAGCAGATGGTGTTGGACATGCGTGTGAAGGATGAAATTTCTCCAACTCTGAGGACTATAGTAAACTTATTTGATGAAAGTAACAGAAGGCCCACTGATGTTCAACTTCACGACAAGAATTCAGCTGAAGATCTTGACACTTCTTTTAATAATGAAAGTGGTTTTGACAGAGAAGAATATGAGAACAGCAACGCCTGGAGTGACGATCACGATGACCAAACGGTTGTTGCCGATGGAGGCTATATTGCTGACGCAGATCCAAGTTTTCCCAATTACCCTCAGGACAGTGATGAGCCATTTCCCTCCCCTGACGCTGATATGGATGACAGATTTGACAGTGTTGACGGATATTTGTTTTTGAGTCTGGGTTTTAATTCAAAGCAAAACGCATGGGCAGGCCCTGATCATTGGAAGTATCGAAAATCCAAAGCCTCAGAGGTTCATCCTACTTCCGAAGATGGGTCGACCCTAAAAACTAGACAGCCTAAGAGTAAGAGACAGGCTGAAGTTGAATTAAATTTCACAAATTCTCTTGAGAAGGAAATGCTAGATATATTTTCTTCTCCCAAGAATCCCAAATCGTTACTACTCCCCGAAAGCAGATTGCCTTGCAATACAAAACTTCCCGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGCTGTTCCTTCTGTCGAATGTGAAGTGTCTCGCGAGGAGGGCAAACAGGTTTCAAGACGGATCTAGAGAACAATCCAATGAATATGAATCATTCCCTACTTGGGACAATGGAAGTGTTGGTGGGGATGACTTTGGTGACTACGGAGGTGATCTTCATAGTGACGTGGAGGACTCCAACACTCTTATTAGTCAGCCTCGCCAGGTCAATAAAATTGAAGTCCAGTACGACAAGACTTCCAAACAAGTTGATGTTCATGCACTAAAAATTACTATTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTCACAGGGTCAAAAAGATACCTTATCTTTCAGGAATATTTTGGCCAACTTTCCTAGTGAATGCAATGCTGCTGCAACCGTTAGTGACATCTCACCTCACTTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACTGCTCCAACTTAGATGATCTTACCATATTCCTTCCACATGTTGCCGACTCTATAAGGGGAACAGTTTAG 2010 0.4328 MAGTLSSNSLVGQKQRFRIQSPINNFFLGSNNDKLERDEARAARAAAIRRKSLGFSQPFLANSDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEQEDDSETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTSLDGVNIESGGEESRKETNKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSLEVPAKCMEKQNQSDISDTIDLSFVKDCIEQMVLDMRVKDEISPTLRTIVNLFDESNRRPTDVQLHDKNSAEDLDTSFNNESGFDREEYENSNAWSDDHDDQTVVADGGYIADADPSFPNYPQDSDEPFPSPDADMDDRFDSVDGYLFLSLGFNSKQNAWAGPDHWKYRKSKASEVHPTSEDGSTLKTRQPKSKRQAEVELNFTNSLEKEMLDIFSSPKNPKSLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLARRANRFQDGSREQSNEYESFPTWDNGSVGGDDFGDYGGDLHSDVEDSNTLISQPRQVNKIEVQYDKTSKQVDVHALKITIWDHVQESVKLPSQGQKDTLSFRNILANFPSECNAAATVSDISPHLCFICLLHLANEKGLSIQNCSNLDDLTIFLPHVADSIRGTV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01627 669 MobiDBLite consensus disorder prediction 155 183 - -
Viun11g01627 669 Pfam Condensin complex subunit 2 67 511 IPR022816 GO:0000796|GO:0007076
Viun11g01627 669 Pfam Condensin complex subunit 2 546 656 IPR022816 GO:0000796|GO:0007076
Viun11g01627 669 PIRSF Condensin_H 541 659 IPR022816 GO:0000796|GO:0007076
Viun11g01627 669 PIRSF Condensin_H 6 547 IPR022816 GO:0000796|GO:0007076
Viun11g01627 669 MobiDBLite consensus disorder prediction 414 440 - -
Viun11g01627 669 PANTHER CONDENSIN COMPLEX SUBUNIT 2 22 659 IPR022816 GO:0000796|GO:0007076
Viun11g01627 669 MobiDBLite consensus disorder prediction 303 347 - -
Viun11g01627 669 MobiDBLite consensus disorder prediction 303 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01627 Viun-Chr11 32567539 32572660 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01627 K06676 - gmx:100799781 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01627 11 32567539 32572660 Viun11g01627 11 32567539 32572660 ECH
Viun5g03117 5 42296892 42301178 Viun11g01627 11 32567539 32572660 PCT