Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01553 ATGTTCAAACGAAGAAAAAAGGATCCGAGTTTTAGTAGTAACAGCAGTGTCTCAGATATAGCAATGCCTCCTTTTCCTCAGGTCAGAACATCTCCAGCATCTTCATTCAAATCCTTCATCTTCATGCTCTCCATTCTCCTCAACCTCTACCTCCTCTTCCTCACGTGGGCCCCATCATTTGCGCCACTTACCTCATCCACTCGCATCACCACCCTCTCCCCGACCACGCGCCGCCACCTCCTTTTCTCCGTCGCCTCCTCCTCCCTCTCCTGGCCTCGCCGCCTCCCCTACCTCCGCCTCTGGTACTCTCCCAACTCCACCCGCGCCCTCTCTTTCCTCGACAAACCACCGCCACTTCCTCTCAACTCCTCCTCCTCCTCCTTTTTCCCGCCGGTTGTGATCTCCGCTGATACATCCGCGTTCCCCTATACTTTCCGCGGGGGGCTGAGGTCTGCGATCCGAGTGGCGCGAGCTGTGAAGGAGGCCGTGGATCGCAACGAGACAGACGTGCGGTGGTTCGTGTTTGGGGACGACGACACGGTGTTCTTCGTCGACAACGTGGTTCGGGCGCTAGCGCGGTACGACCACCGCCGGTGGTTCTACGTCGGGAGCAACTCCGAGAGCTACGAGCAGAACGTGAAGTACTCGTTCGAGATGGCGTTCGGCGGTGGCGGCTTCGCGATCAGCAGTTCCCTCGCCAGGGTTTTGGCGAGGGTTTTGGACTCTTGTTTGAGGAGGTACGCACACTTGTATGGCAGCGATTCTAGGATTTATTCCTGCGTTGCTGAGCTCGGTGTTGGCTTGACTCATGAACCTGGCTTTCATCAGTTGGATGTGCGGGGGAATTTGTTAGGGATGCTAGCTGCACATCCATTGTCTCCATTGTTGTCCCTTCATCACTTGGAAGCAATGGAGCCCATATTTCCCGACATGGACAGTTTACAGGCTTTGAAGCATCTTGTTGCCGCTGCAAATGTAGATCCTGCCAGGATCCTGCAGCAAACTGTCTGCTATGATCAGTCAAATTCTTTGACTTTCTCTGTTTCTTGGGGTTTTGCTATCCAAGTCTATCAAGGAAATGAACTTCTACCTGACCTCCTCTCGGTACAGAGAACTTTTGTTCCATGGAGGAGGGGTAGTAAAGTCAATGCCAATTTCATGTTTAACACCAGAGACTATCACAGAGATCCTTGTAAAAGGCCTTCAGTATTTTTCTTCAAAAGTGCTACATCTGATAAAAGGGGCATTTGGAGCAGTTACAGTAGGCATGACGATGGGAACTGCTTTGAATCCGATGTTAGACAGCTCGAGCAGATCATAGTTTTTTCAAGGAAGCTGCAGCTTAATAATGACCAGATGAATGCCCCCCGTCGTCAGTGCTGTAGCGTCTTACCACCATCTTCTAATTATACAACCAATCTTCACATTAGACAGTGTGAAATCAATGAACTGATCTCCATGCAATCATAG 1470 0.5116 MFKRRKKDPSFSSNSSVSDIAMPPFPQVRTSPASSFKSFIFMLSILLNLYLLFLTWAPSFAPLTSSTRITTLSPTTRRHLLFSVASSSLSWPRRLPYLRLWYSPNSTRALSFLDKPPPLPLNSSSSSFFPPVVISADTSAFPYTFRGGLRSAIRVARAVKEAVDRNETDVRWFVFGDDDTVFFVDNVVRALARYDHRRWFYVGSNSESYEQNVKYSFEMAFGGGGFAISSSLARVLARVLDSCLRRYAHLYGSDSRIYSCVAELGVGLTHEPGFHQLDVRGNLLGMLAAHPLSPLLSLHHLEAMEPIFPDMDSLQALKHLVAAANVDPARILQQTVCYDQSNSLTFSVSWGFAIQVYQGNELLPDLLSVQRTFVPWRRGSKVNANFMFNTRDYHRDPCKRPSVFFFKSATSDKRGIWSSYSRHDDGNCFESDVRQLEQIIVFSRKLQLNNDQMNAPRRQCCSVLPPSSNYTTNLHIRQCEINELISMQS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01553 489 Pfam Protein of unknown function, DUF604 211 461 IPR006740 -
Viun11g01553 489 Gene3D - 70 308 - -
Viun11g01553 489 PANTHER FRINGE-RELATED 40 485 - -
Viun11g01553 489 FunFam Fringe-related protein 69 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01553 Viun-Chr11 31859843 31863766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01553 4 489 Glycosyltransferase AT4G15240 57.143 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01553 - - gmx:100813277 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01553 11 31859843 31863766 Viun11g01553 11 31859843 31863766 ECH
Viun11g01553 11 31859843 31863766 Viun5g03054 5 41721200 41722939 PCT