Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01534 ATGCCTGAGGCTCCTAGCCACTACCTCTGCAACAACAATAATGAAGCACTGAAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTTGCTGAGATCCTTTCCTCCAGTGCACATGCTGAGTACCTTCAACGCCATGGCTTAGATGGCCGCACAGACAGACACACTTTCAAGAACATCATGCCTGTGGTCACGTACGAGGATTTGAAGCCAGATATCGATCGTATAGCTAATGGTGATACCTCCCAAATTCTATGTTCCAAACCTATTTCCGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAGCTGATGCCAACCATAGAAGATGAACTTGAGAGAAGATCATTACTGTACAGCCTCTTGATGCCAGTGATGGACCAATTTGTTCCAGGTTTGGAGAAAGGCAAGGGTATGTACTTTCTCTTCGTAAAATCAGAAGCCAAAACCCCAGGGGGGCTCCTAGCTCGTCCAGTTTTAACCAGTTACTACAAGAGTTCACATTTCAAAAACTCTAAACAAAGATACGATCCCTACACAAACTACACCAGTCCCATTGAATCCATTCTCTGCCTAGACTCTTACCAAAGCATGTATTCTCAGATGCTTTGTGGACTTTCACAAAACGAACAAGTTCTTCGTGTTGGGGCCGTTTTCGCCTCAGGCTTCATCCGTGCCATCAAGTTCCTAGAAAAGCATTGGGTGAGTTTGTGCCGTGACATAAGAAATGGCACCGTAGACCCAGAAATCAGTGACTCGTCTGTGAGAGAGGCCATCATGAAGATCCTCAAACCAAACCCCAAGCTTGCGGATTTCATCGAAGGTGAGTGCAAGAAGGAGTCTTGGAAGGGGATCATCACTAGGGTGTGGCCAAACACCAAGTATGTTGATGTTATTGTTACAGGAACCATGTCTCAGTATATTCCGATATTGGATTACTACAGCAATGGTCTCCCTCTTGTCTGCACCATGTATGCTTCGTCTGAGTGTTACTTTGGCCTCAACTTGAACCCTTTGTGTGAACCGAATGAGGTGTCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCACTCGAAAAAACCAAGGGACAGACCAATATTTCTATTTCTCAACCTGACCAGGAACGTTTGGTTGATCTTGTGGATGTGGAGTTGGGTCAAGAATATGAGCTTGTGGTCACCACTTATGCGGGACTTTACAGGTACAGGGTTGGTGACATACTCCGTGTAGCAGGATTCAAGAACAAGGCACCACAATTCAACTTCGTGTGCCGAAAGAATGTGGTTTTGAGCATTGATTCTGACAAGACCGATGAGGTTGAGCTGCAAAATGCTGTGAAGAATGGAGCGAAGCGTCTTGCAGATTTCGGTGCATCACTCACAGAATACACAAGCTGTGCTGACACGTCCACTATCCCAGGCCACTATGTGCTGTACTGGGAGATTAACACCAATGATGAGACCCCAATTCCTGGTTCTGTTTTTGAGGAGTGTTGTTTTGCAGTAGAAGGGTGTCTGAACAGTGTTTATAGACAAGGAAGGGTGTCAGAGTCGATTGGAGCACTGGAAATAAAGATTGTGGAGAATGGAACCTTTGACAAGCTTATGGACTTTGCTCTGAGCCAGGGTGCGTCCATAAATCAGTATAAGACACCTCGTTGTGTGAAATATGCTCCCATTGTTGAACTTCTGGATTCCAAGACAGTTTCCAGTTACTTCAGTAGAAAATGTCCACAGTGGGTCCCTGGTCACAAGAAATGGTGCATGTTCCCTTGA 1806 0.4557 MPEAPSHYLCNNNNEALKYIEDVTSNADEIQKRVLAEILSSSAHAEYLQRHGLDGRTDRHTFKNIMPVVTYEDLKPDIDRIANGDTSQILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQFVPGLEKGKGMYFLFVKSEAKTPGGLLARPVLTSYYKSSHFKNSKQRYDPYTNYTSPIESILCLDSYQSMYSQMLCGLSQNEQVLRVGAVFASGFIRAIKFLEKHWVSLCRDIRNGTVDPEISDSSVREAIMKILKPNPKLADFIEGECKKESWKGIITRVWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCEPNEVSYTLIPTMAYFEFLPLEKTKGQTNISISQPDQERLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGAKRLADFGASLTEYTSCADTSTIPGHYVLYWEINTNDETPIPGSVFEECCFAVEGCLNSVYRQGRVSESIGALEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSSYFSRKCPQWVPGHKKWCMFP 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01534 601 Pfam GH3 auxin-responsive promoter 20 566 IPR004993 -
Viun11g01534 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 13 587 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01534 Viun-Chr11 31568645 31571732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01534 9 584 EF-hand Containing Proteins AT1G23160 48.805 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01534 K14487 - gmx:100819676 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01534 11 31568645 31571732 Viun11g01534 11 31568645 31571732 ECH
Viun5g03034 5 41526285 41530318 Viun11g01534 11 31568645 31571732 PCT