Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01490 ATGAGGCGAAGAAGCGCAGATTTTCGAAGACCAGGGAAGAGGAGGCTCCAGGATGTAGTGTGGTGGATATCGAGTTCCGTTTTGATTCTTTTCTTTATTTATATTCTCGCCAAAGGTTCCACCAAAATCGACTCCGCTCACCAATTCTCAAGGAGAACTTTCAGGCGTGACAGGGTTATTGAAGGGTTCAATGTTACGGACGAGATGTTAAGTCCTGAGTCTGTGACCAGACAAATTAATGATCAAATCTCACTGGCAAAAGCTTTTGTTGTAATTGCCAAAGAAAGTAACAACCACCAATTTGCTTGGGAGTTAACTTCTCAGATCCGCATTTCACAGATTTTTCTCTCAAATGCTGCCACGAGGCGTACTCCATTAACAATCAAGGAATCAGAATATGCAATTCGTGATATGGCCTTGTTACTGTTTCAGGCCCAGCAGCTCCATTATGACAGTGCAAGCATGATCATGAGACTGAAAGGAAAAATTCAAGGTCTTGAAGAACAGATGAGTTCTGCAAGTGAGAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAGAGCCTATTTTGCCTTGGTGTCAGGTTGACATCTCAATGGTTCACGAATCTGAGCCTGCAGAAGAATTTGAAGGACCAAAGACAAGTGGACATGAAACTGAAGGACAATGATCTTTACCACTTCTGTGTCTTTTCTGATAATATCCTCGCTACCTCGGTTGTAATCAATTCCACTTCGATAAATTCCAAAAACCCAGATAAGATTGTTTTTCACCTTGTCACAGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTTCTTTGAACGATTTTCGAGGGGTGACAGTTGAAGTTCAAAGGTTCGAAGACTTCAGCTGGCTGAATGCTTCATACGTTCCTGTGCTTAAGCAGCTACAAGACTCAGAGATACAGAACTATTATTTCAAAGGCAACAATGATGATAACAAAACTCCCATCAAGTTCAGGAATCCGAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGAGCTGAAGAAAGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTCTCTGATCTTTTCACCATTGATTTGAACGGGAATGTGAATGGAGCGGTTGAGACATGCATGGAGACATTTCACAGATACCATAAATACTTGAACTACACACACCCTCTGATAAGAACACATTTTGACCCTGATGCTTGTGGGTGGGCATTTGGGATGAACGTGTTTGATTTGGTTCAATGGAGGAAAAGGAACGTGACAGGAATCTACCACTATTGGCAAGAAAAGAATGCAGACAGAACATTGTGGAAACTTGGTACCTTGCCACCTGGGTTGTTAACCTTCTATGGGCTCACTGAGCCATTGGATCCATCATGGCATGTGCTGGGTTTTGGCTACACAAATGTTGATCCTCAGTTGATAGAAAGAGGGGCTGTTCTACACTTCAATGGGAACTCTAAACCGTGGTTGAAGATTGGAATGGAAAGGTACAAGCCTCTGTGGGAAAAGTACGTGGATTATTCTCACCCATTATTGCAACAGTGTAATTTTCATTGA 1605 0.4199 MRRRSADFRRPGKRRLQDVVWWISSSVLILFFIYILAKGSTKIDSAHQFSRRTFRRDRVIEGFNVTDEMLSPESVTRQINDQISLAKAFVVIAKESNNHQFAWELTSQIRISQIFLSNAATRRTPLTIKESEYAIRDMALLLFQAQQLHYDSASMIMRLKGKIQGLEEQMSSASEKSSKYGQIAAEEVPKSLFCLGVRLTSQWFTNLSLQKNLKDQRQVDMKLKDNDLYHFCVFSDNILATSVVINSTSINSKNPDKIVFHLVTDEINYAAMKAWFSLNDFRGVTVEVQRFEDFSWLNASYVPVLKQLQDSEIQNYYFKGNNDDNKTPIKFRNPKYLSMLNHLRFYIPEVFPELKKVVFLDDDVVVQKDLSDLFTIDLNGNVNGAVETCMETFHRYHKYLNYTHPLIRTHFDPDACGWAFGMNVFDLVQWRKRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGMERYKPLWEKYVDYSHPLLQQCNFH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01490 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 67 533 IPR029993 GO:0047262
Viun11g01490 534 Coils Coil 156 176 - -
Viun11g01490 534 Pfam Glycosyl transferase family 8 236 508 IPR002495 GO:0016757
Viun11g01490 534 CDD GT8_like_1 229 522 - -
Viun11g01490 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Viun11g01490 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01490 Viun-Chr11 31088515 31091264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01490 1 534 Glycosyltransferase AT2G20810 76.536 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01490 K13648 - cave:132183226 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01490 11 31088515 31091264 Viun11g01490 11 31088515 31091264 ECH
Viun5g02975 5 41060017 41063568 Viun11g01490 11 31088515 31091264 PCT