Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01469 ATGCCGCAGCACCAACCAACCTTAATGGAACCTCTTCTCACCCACAACCCCGGCAATGGCAACCCCAACTATCGCTATGATGTCATAAACTGGTTTGAACATGTATCCCAGAATGCTGCTTATGTTCAGACTCAGTTGCTCGCCCAGATTTTGAAGCAAAACTATGGTGTCGAATATCTCAACAAATGGTTGGGGAACTACAATATCCTTGAGATCGACGCATGTGCATTGGAATCCCTTTTCTCTTCTGTGGTTCCCCTTGCTTCACATGCTGACTTTGAGCCATTTATCCAAAGGATTGCTGATGGGGACACAGCTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACAACAGAGGGGAGGCAGAAGTTCGTACCCTTTACTCGCCATAGTGCACAAACCACGCTTCAAATATTCACCCTAGCAGCAGCCTATAGATCAAGGGTTTATCCAATAAGGGAAGGAGGAAGGATTCTTGAATTCATATACAGCAGCAACAGGTTCAAAACAAAAGGAGGTTTAACAGCAGGAACAGCCACAACACACTACTATGCGAGTGAAGAATTCAAAATCAAGCAGGATGCGACCAAATCCTTCACTTGCAGCCCCCAAGAAGTGATTTCTGGTGGAGACTACAAGCAATCCACGTATTGCCACCTCCTTCTTGGCCTCTTTTACTCTGACCAAGTGGAATTTATCACCTCAGCTTTCATCTACAGCATGGTGCAAGCTTTCAGCAGTTTTGAAGAGAATTGGATAGAGATTTGCAATGACATCAGAGATGGCACTCTCAGTTCAAGAATCAAGTCACCGAAGATGAGAAAGGCTGTTTTGGACATCATCTCTCCAAGCCCAGATTTGGCTTCGAAGTTGGAAAGTGCTTGCCATGAGCTAGAACTGGAAAAGTGGTCTGGTTTAATTCCAAAACTGTGGCCAAATGCTAAGTATGTGTACTCCATAATGACAGGGTCCATGCAACCATATTTGAAAAAGCTCAGGCATTATGCAAATGGGTTGCCTTTGGTCAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGATCCTAGTTTACCACCAGAACATGTAACATTCGCTGTGGTTCCTACTTTCTCTTACTTTGAGTTCATACCACTTCACAGGAATGAAAACAATTTCGGTTCAGGAGCTGATGATTTCACAGAAGATAAGCCAATTCCTCTCTCTCAGGTTAAAGTTGGACAAGAGTATGAAGTTGTCCTCACAACTTTCACCGGACTATACAGGTGCAGGCTAGGGGATGTGGTGGAAGTGGGTGGATTCCACAATGGGACCCCAAAGTTGAACTTTGTGTGTAGAAGAAAGCTAATATTGACAGTAAACATAGACAAGAACACAGAAAAGGACCTTCAACTAGTGGTAGAGAGAGGGTCCCAGATTCTGACGAAAGAAAAAGCGGAGCTGGTTGATTTCACAAGCTATGCAGATGTGTCAAAGCAACCAGGGCACTACGTAATATTTTGGGAGATAAAAGGTGAGGTAGAAGACAAGATCCTTGGTGCATGTTGCAGTGAAATGGACAAATTGTTCATGGATCATGGGTATGTGGTGTCAAGAAAAACCAACTCGATAGGACCCTTAGAACTCTGCATTTTGGAGACTGGAACTTTCAAGAAGATTTTGGACAACTTCATCGCAAATGGGGCAGCCTTGAGCCAATTCAAAACCCCCAGGTGCACCAGTAATCGTGTCCTCCTCAAAATTCTTAACACGTGCACCACAAAAAGCTTTCGTAGCACTGCTTACAACAACACTTGA 1824 0.4408 MPQHQPTLMEPLLTHNPGNGNPNYRYDVINWFEHVSQNAAYVQTQLLAQILKQNYGVEYLNKWLGNYNILEIDACALESLFSSVVPLASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSNRFKTKGGLTAGTATTHYYASEEFKIKQDATKSFTCSPQEVISGGDYKQSTYCHLLLGLFYSDQVEFITSAFIYSMVQAFSSFEENWIEICNDIRDGTLSSRIKSPKMRKAVLDIISPSPDLASKLESACHELELEKWSGLIPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEHVTFAVVPTFSYFEFIPLHRNENNFGSGADDFTEDKPIPLSQVKVGQEYEVVLTTFTGLYRCRLGDVVEVGGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQILTKEKAELVDFTSYADVSKQPGHYVIFWEIKGEVEDKILGACCSEMDKLFMDHGYVVSRKTNSIGPLELCILETGTFKKILDNFIANGAALSQFKTPRCTSNRVLLKILNTCTTKSFRSTAYNNT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01469 607 Pfam GH3 auxin-responsive promoter 31 585 IPR004993 -
Viun11g01469 607 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 27 604 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01469 Viun-Chr11 30848626 30852007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01469 27 602 EF-hand Containing Proteins AT1G23160 35.025 2.74e-120 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01469 K14487 - gmx:100792358 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01469 11 30848626 30852007 Viun11g01469 11 30848626 30852007 ECH
Viun5g02960 5 40943408 40947051 Viun11g01469 11 30848626 30852007 PCT